Clone Read LE_HBa0001L04_SP6_127594

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001L04_SP6_127594
Primer
SP6
ID from Seq. Facility
Le-HBa001_L04-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
280 trimmed for vector and quality, 1181 raw
Genbank Accession
DU068212
Sequence
>LE_HBa0001L04_SP6_127594 (raw untrimmed)
GAATTATAGTTATGGGAATTGTTTGCATCGCTTCGCTGGAAGTACAGAGCTGGAAGAAATAATCCTTTTTTAGTCTTGGATTTCGGCAGTTTTTAGTTAC
AGTTGATTCCCTCCGGCAACTTTCTCAAGCACCACTTGAATCTTGAAGTTCTTTAAGATTTGCAAAGAAGTTTTCAAGCACCAAACTCTAACTGACTGGA
ATGGAAGGTGATTGAGGACAAGATGTTCTCCTTGGAGGCATTCCTAGTTGTTAACAGAAAGACCTTTCATCTAATGAGAAACTTCATAAAGGATAAATTA
AGTTAATTTGCCTTCTACGTAATCATTTTACTTCAGTTGATGGACATTCTTGTTTTGTTTTACAGGAGATCGCTTGATTAGTACTTCAAAGGGGTTTTGC
ATAAGTCATTTCTGAATCTAATACAGTTTAGCTAATTTCTTGCAGTAGCTCCAACAACTGTCAACCACCACTACCAGCAGTCCACCAAATAATCCAGATA
GAAGAAATTCTTACATGGGAAAAAAGCAATCAATGAATAAACCATGAACAGTAAAAACTGGATTACGTTCTCAAAATTTCTCTTCGGAATCACGAAATGC
TAGGTGATGGAGAAACATAGAACCTGACCTAGATACAAGGTAAGTAGATGATTACTTGTATTACTACGCCATTGACGGCCTATACCAATGAGTCCCTTGG
AATACTCAATCAGAAAAACAACCCTCAATGGGCAATCCCCTCCAGAGCCCCCCGCTAGCCACCCCAATGTCTTCCCAATTCTTGAGGCGTAAATATATAA
TGACTGTGTGATGTCAATTTTCAAATCAATGTTCATCTACAAGTATTACAGAATAGATCTCATTTTTCTTCGTTCATCCTTTGTATTTCTTGTTTCGCAT
GCCAACTATCGCTTACCTGAATGGCTCATGGCGCGACTTTACTACTCTTCTTCTTGCCCGCTCGCACTTTGAATCCCTGTCTAGTTTCTTTCCTCTAAAG
TGTTGTATGATGTAGGTTTTGATTTGAATTTATGAAAGTTTTATTGATTCCGTATATTCTGTTTTCTTAGAAGTCCGCTTTTCTTCGATACGCGCTTCGC
CTGAACATATCTCTATCACTGAGCTAGCTTCTAATTACATGTACTAAAGTGCACCGATGACCCACCCATCAAGATCAAAGA
>LE_HBa0001L04_SP6_127594 (trimmed for quality and cloning vector)
ACTTTCTCAAGCACCACTTGAATCTTGAAGTTCTTTAAGATTTGCAAAGAAGTTTTCAAGCACCAAACTCTAACTGACTGGAATGGAAGGTGATTGAGGA
CAAGATGTTCTCCTTGGAGGCATTCCTAGTTGTTAACAGAAAGACCTTTCATCTAATGAGAAACTTCATAAAGGATAAATTAAGTTAATTTGCCTTCTAC
GTAATCATTTTACTTCAGTTGATGGACATTCTTGTTTTGTTTTACAGGAGATCGCTTGATTAGTACTTCAAAGGGGTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.934955
Expected error %
1.4404
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001L04
Clone
Clone name
hba-1l4
LE_HBa0001L04
P001L04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found