Clone Read LE_HBa0167A10_T7_12691

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0167A10_T7_12691
Primer
T7
ID from Seq. Facility
LE_HBa_167_A10-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1518 raw
Sequence
>LE_HBa0167A10_T7_12691 (raw untrimmed)
TATAAATTATTATCTCTATAGACATACATTCTGGAGTTCTTCGTAGGTGGTTATTTCTTCCTTATATAGCTTCAGTACTCCTTGTCGATCTNACACTCGT
CTAACAGCGTCTTTATACTCCTCCGTGACACGCCTCTCCAACCGCCACACCCTACTCTTAGTACGCTCGTCCGCATCAATCGTTTCTGCGTCGTAGATGT
GTACGAANCCTCGTGCTGCTAATCGTCCCATTCAGTGGAAGCCAGTGNGCTGCTACTCAGTGTAACCNGNGGTATATGGCATNCTCTGCGCTCACCTCTT
GAACCCTGAGTACTCTGTGTATAGTCGCTGCTTTGAATCTCTGTGTATACTTTTCTCGCACGCTGCGGTAGCTCTGCGTGCATAGTATTCTCTGCGTACT
CTGTGAAACTATCTCNCCGTAAGGATNGTGCTCTCTACTACTGCGATTACTCAGGTGCCTCTGTTTGCTCAGCCTGAATATTGATCTTGTGAGGACCGCG
CAATCTCGCGTAGAGTGTATATCCNGCGAATACAGAGCTNCCGGAGTGCATTGAGTATACCGTGCGTACTGGGAGTAATTCATACTGAGTGTACTGCATC
AGCTCTTATCCTCCTCACTTTATCTTCTAACAATGAATCAATGCTCGTACTTCTGTGTATGTTTGTATNTTACTTTGATCCTAATCTATTTACTAATCCC
TATGTTTTCTAACTTATGTTATCTTCTCTATGATCTTTTTACGCATAACTTCTACAGATGTCTCATCACTATTCTACTGATGCATTGTTGCTATCTTTTG
GTGCCTCTCCGCTGTATCACTTTAGTTCTTGTACTTATAATGTATGTCGTGATCATTATTTTCACACTTTTACCAATGTTCTAATTTTATTATTGTTTGC
CTGCTATTCTTTATTATTTCACGCTGCTCTCGTCTTTCCTAGCTATTGCCTCTACTTGCACATTTTCGTCTTTATTGTTCTATACTCTCATTGTACTTGT
GTTATCTTTGCTTGCTGTTCTGTAGACATTATATCTTTTCTTACTATATATCTCTTGCTCATTATTCATTAATACTAGCATACAAGCTTGCTTATCTTGT
TTCTTCTATACTACTACCTATACTTATTACTTGCGTCTCACTNCTTGAGTGTGATTGTATGACTTTTGTATACATACACTACTATCTCGATGTCATGCTT
GTTCACTGTGGCCTTTACGCTGGATGATGTGCTCTTTTTATTCTATTTCTGCTTCCTAGTCGCTCTATTACCTGTCTTGTTATGTCTCTCTTCTCTGTCT
TACTAACTGATCAATTGCATAATCACTCTTCTGCTCTATCTTACGTCTCTACTCTGTTTGTATTCTGCTTCTCTTCTCCTTGTCATCTTCCTTACTTCAT
TCCAGATCTCTTATACAAGATTATTTTCTCCGCATACTCTTTACTCTCGTACCATCTTACTCTATATGTGGTTATTTGGTCTGACACTCTGCAGCGTACT
CTTNTGTCCTTGTACTCT
>LE_HBa0167A10_T7_12691 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0167A10
Clone
Clone name
hba-167a10
LE_HBa0167A10
P167A10
Clone type
BAC
Contamination
none
Estimated length
105,231
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found