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Clone Read LE_HBa0054N05_SP6_12536

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0054N05_SP6_12536
Primer
SP6
ID from Seq. Facility
LE_HBa_054_N05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 866 raw
Genbank Accession
DU031267
Sequence
>LE_HBa0054N05_SP6_12536 (raw untrimmed)
AACAAGGGGGGGATCAACTCTGGGCTTTTCTCGATAAATTTCCGAAAAACATTAGGATGCCTGTTGATGTCCTCAGAGATATTCAGGTTTTACTCACTCT
ATGTTGCACAACAAGTTGTTTATAGTAAGATTGATCTAGTTGTTATTTCCCTTCTTTACCAATGCAATAAGTACATTAGTATATTACATTGATTTTAACC
TTTATTAGCATCATCTGATTGAGTTCAATTTGATTACTAATTAAGTTAGACTATAGTTAATGTTGACACAATCAAGATTCGTTTAGTTTTATGCTGTTTT
CTACTCTTTTATTGCTTTGATTTGAGTAAAATTTTTGTTTTCCTTTTCAATTCTAATATGATTTATGCAGAGCCAATATAATGAATTAGAGGCACAGTAC
CTTGAGGAGAAGGCAGCTCTGGAAGCAAAGTTCCACAAGTTGTATGAGCCACTTTACAACAAGGTAATGTGTATGTGTGTGTAGTGTGCATATATATGTA
TAGTTTCTATAACATATTTTTTGGTGCATTTGCAGCGATGTGAGATTGTGAATGGCGTGGGTGAAGCTGGAGATGAAAGTACAGTAGGAGAAGAAACAAA
TGAATCAGCAGGAGGTATTCTTTCAAGGCTATCATGTTTTAAGTCAATATGTTTTTCGAGCTTTCCTGTGCTGTTTGTGATAAGAAATGAATCTTGCATT
CAGATAAAGGTATTCCCCATTTCTGGTTGTTGGCAATGAAAAATAATGAAATAATCGCGAAAGAGGTTATATGAGTTTATTCTTTCCTTTGATCTTTTGC
CTATAACTTGTCCCACGAATGATAAGTCTGCTTAATTTCGTCTGTTCAATTACTGAAAAAATGAAA
>LE_HBa0054N05_SP6_12536 (trimmed for quality and cloning vector)
TTTTCTCGATAAATTTCCGAAAAACATTAGGATGCCTGTTGATGTCCTCAGAGATATTCAGGTTTTACTCACTCTATGTTGCACAACAAGTTGTTTATAG
TAAGATTGATCTAGTTGTTATTTCCCTTCTTTACCAATGCAATAAGTACATTAGTATATTACATTGATTTTAACCTTTATTAGCATCATCTGATTGAGTT
CAATTTGATTACTAATTAAGTTAGACTATAGTTAATGTTGACACAATCAAGATTCGTTTAGTTTTATGCTGTTTTCTACTCTTTTATTGCTTTGATTTGA
GTAAAATTTTTGTTTTCCTTTTCAATTCTAATATGATTTATGCAGAGCCAATATAATGAATTAGAGGCACAGTACCTTGAGGAGAAGGCAGCTCTGGAAG
CAAAGTTCCACAAGTTGTATGAGCCACTTTACAACAAGGTAATGTGTATGTGTGTGTAGTGTGCATATATATGTATAGTTTCTATAACATATTTTTTGGT
GCATTTGCAGCGATGTGAGATTGTGAATGGCGTGGGTGAAGCTGGAGATGAAAGTACAGTAGGAGAAGAAACAAATGAATCAGCAGGAGGTATTCTTTCA
AGGCTATCATGTTTTAAGTCAATATGTTTTTCGAGCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.93594
Expected error %
0.192599
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0054N05
Clone
Clone name
hba-54n5
LE_HBa0054N05
P054N05
Clone type
BAC
Contamination
none
Estimated length
115,928
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found