Clone Read LE_HBa0176P02_SP6_124768

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0176P02_SP6_124768
Primer
SP6
ID from Seq. Facility
LE_HBa_176_P02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
425 trimmed for vector and quality, 454 raw
Sequence
>LE_HBa0176P02_SP6_124768 (raw untrimmed)
GTCCGCGGGCCCGTCATTCCCTCACCTCGCTTTGACCAGTGACAATTTGACTTTGATTTCGGCAAAATCCCATATTTTGGGGTTTAAAAGATCTGTATTT
GGTTGATGTTTTCTCTTGTTGCACATAGAGACACTTTCGTAACTGATAAGGACTTCTTCAATGGTTGGCGTCATTTCCATTTCTCCGAATCGAAAGACCA
TATTCTTACTATCCCAAAATTTCACCGTCGTTCTGATTAAACCAAGCTAAGCATTCATTTCTAGCTGCGACGGAAGATAGCCTGTGTATCTGAACTATCA
TCTTATCATCTTTATTCATGAATATTCACCATACTTTGAGGAAAGGATCTGGGATGGTAACCATTCTTTTTTTCAAAGGCTCGTGTGTCGGATCCATTCC
TACAAAAATAGCAGACAAAGATAGTTAACCCCCACCCCATAGACAATAAAATTG
>LE_HBa0176P02_SP6_124768 (trimmed for quality and cloning vector)
CTTTGACCAGTGACAATTTGACTTTGATTTCGGCAAAATCCCATATTTTGGGGTTTAAAAGATCTGTATTTGGTTGATGTTTTCTCTTGTTGCACATAGA
GACACTTTCGTAACTGATAAGGACTTCTTCAATGGTTGGCGTCATTTCCATTTCTCCGAATCGAAAGACCATATTCTTACTATCCCAAAATTTCACCGTC
GTTCTGATTAAACCAAGCTAAGCATTCATTTCTAGCTGCGACGGAAGATAGCCTGTGTATCTGAACTATCATCTTATCATCTTTATTCATGAATATTCAC
CATACTTTGAGGAAAGGATCTGGGATGGTAACCATTCTTTTTTTCAAAGGCTCGTGTGTCGGATCCATTCCTACAAAAATAGCAGACAAAGATAGTTAAC
CCCCACCCCATAGACAATAAAATTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96139
Expected error %
0.112
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0176P02
Clone
Clone name
hba-176p2
LE_HBa0176P02
P176P02
Clone type
BAC
Contamination
none
Estimated length
111,415
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found