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Clone Read LE_HBa0168B23_T7_123685

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168B23_T7_123685
Primer
T7
ID from Seq. Facility
LE_HBa_168_B23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1908 raw
Sequence
>LE_HBa0168B23_T7_123685 (raw untrimmed)
TATATTACTATGCTGTTCGAGTATCAGAGGTGTGGGGAGTCAGTGTGGGTGTGGGTCGAGTGTGATTGATGGNGCGTTCTAGTGGTGCCTGTGTCTGATG
GTNATAATGCGTTGTGGATGTGATAATCCATTGCNAGAGTGGTTGANCACCTCCCTCTTTGTATAATGTTCGCTACGTTGGACTGCGTTGGCCTCGCCTT
GGGCGACGTGCTCCTACGTGTTAGTGGTACCCCCTCTTGTCATATGACGTGTGGCAGTAGATGATGTATGTGTTGGTGGTGATATGGCTGTGTGTTGNTT
ATCTTTATNTAGCTGTANTTNGTATTACTGTTCGATGAGTTATCTTGGTCGACGCGATGTGAGTTGCANTGATAGGTGTAGTTGTNCTAGCGACTAGTGT
GTTCATACGAGCTGTGATGTTAGTNTGTGTTGTTGTATATGACGTCTTTCTATGTACTTGNTAGAATGGACTATGTTTTGTGTGCTTATATGTATCGTTN
TATGTGAGTGTNTGTGTTTGGGTGCGAAGTGTGATATGTGTTGTATTTTATGTTTTGCGTGCACTGAGAAGTAGTGTCGGATGTTAGTAGTGTCGATGTG
TGTAGGTACGTCTGTATACGCTGTGTACTAACAGTAGCGAGCGATAGACTAGGATGGGTGTTGATATCTTATTGTGTACTAATATACATATACANTGTAT
ATTGTGTGTATTGTGTATACGTTGTGGTGCGTATNCCTCTCTGCTTCATATATTGCAGAATACGTTATACTACGATATGTACGTTACGTATTNGCGTAAT
TGTNATGTATCGTGGTNAGCATGTATCTTATCTATATACTGTTGTAGTAATATATGCATAGTCATATAGCGTTTATGTGTGTGTATNGATATTGCNATCT
GATGTATGTTGTACTTATGTNTATTATAGACTGTCTNGATTGTGTGTTTGATTGGTTTGTNGATGTNGGTGTATGATGTATTGATGTTCGTTGTTGTGTG
TATTANGTATGGTGCTATAGTGTGTGTGCGAGTGATTGCGTCGGGATAATGGTCGAGGGANAGAGCGAGTGCTATACGTCGCGTTGTANGTGCGTATCGT
TGTTTGGTGTGTTGATCGTGATGGCGTCGTGACGTGTAGACGNCTGTGATGTAGGANTNATGGTANTTNGTATAGTNACANAATATANATAGTANTAGGT
GAGTGTANGGCGTATGTAGTATGTATGNATGGATGTATGATGATCGAGTACGTGTNGCATGANGNGTAGAGCTATATGGTNGTTTANGNATTATGATTNT
GTAGTACACTATTGTGNANCTTTNGCTCTNAGTAGAGTAGTTAGATATGGTGGCATGGATGGANGNANAGTNGTGTGCGCTATGGTACTATGTCGTAGTC
TCGTGTGAGATGANGTTACGCATGTATATATATCTAGTAGTGATTTTTTTNCAGANANTGTATGCTTCAGTATGTATTGTATNTACTTTNGTGTGTCATG
TTNGTTGTGATGTGTGCGTATANTNNGTTGATACANGATGTTTGTNGNGCNCTTGACTCNCGTGTGANNTGAGCTGACATGTACATNGCTATGTGCAGGA
TGCNTTAGTGTGCGTGTACGTTTGCNGTTGTNTGGTGCTCGTATATTANTGATNGATGTTGNCTAGATNTGTATACTGTGATGTACGNTACACGAGATTG
CACTTCTGAGTCGGTAGACNGANGANTGATTTTNTNANTNCACTNAGCGATAANTTTATTGCANCANCTCGTTNCATACTACGNATATTTTAGTGTNTGT
GNTANGTCTATNAGTGTGTATATATAGATTTATTGTAGTGACTGTATGTACTGTTGTGTAGGTTGTTGATGTCGTNTCGACTTCTAGTCGACTTACTGTT
TGNTGGTG
>LE_HBa0168B23_T7_123685 (trimmed for quality and cloning vector)
CTG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.4989
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168B23
Clone
Clone name
hba-168b23
LE_HBa0168B23
C11HBa0168B23
P168B23
Clone type
BAC
Contamination
none
Estimated length
121,088
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found