Clone Read LE_HBa0142C16_SP6_122549

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0142C16_SP6_122549
Primer
SP6
ID from Seq. Facility
LE_HBa_142_C16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
473 trimmed for vector and quality, 932 raw
Genbank Accession
DU052740
Sequence
>LE_HBa0142C16_SP6_122549 (raw untrimmed)
GGGAAGGTTGGGTCCTAGATGAAAGTTGGTCTGCGTCGCGGACTAGGGTCTCCCATGGCCAAAATTTTGGTCTGTTTTGCGGAACAACACAGAATGGCTT
GTTCGAAAATCTTTTTTCAAAAATAATGCGGGAACAACTCCATGTCCCGGACTTGCTCCTCGACTATAATTTCGAAAATTGAAGTTACGTTAGACTTGTC
TAAAAGTGTCAAATAAGTATGGGGGTGTTTTGGTAACTTTGGGTGACGGTATAAAATTTCTATGACCTATTTAACCCCTTCCCAAGTCAAAGCCCTAATA
CCCAACAAGAAAATCAAAAATCCCAAAAACTTCTTCTCTTCGAAAACCCCAAAAACTCCATTGGAGACCAAAACACAAGTTCAAGCTAGGGGCTGAATTT
CTATAGTTTCTTCTCAAAATTTTCTTGGGTATTCAATCAATAAGGTTTGATAATAGTTGATACTTAGTTAATCTTCCATCTAAGGAGTTCAATCAATGAT
TTTCAAAAGTGATTCAAAGACCAAAATCCCCAAATTTTCAATCTATCCATGGTTCATTGTCAAAATGATTACAAAGGTCATATTAACGATGGATTAATGT
TTAAAATGGCTGTATAAAGACTAACTGTCAATCCAAAATATTGAAAAAAATTAATGAAAAATCCTAATTTTCTCTAATCCCCCCTATCTCCTTCCTGTTT
CTCTCCCGACGGAGAGAGATTATAGGGAAGAGAAAAAGAGAGATGACCAGGTATGATGAAATTCGTAGCAATTACTAATGTATTTGTATACATTTATATA
TATTTATAAAATTTTTTAATATAGATTATTTATTTTTATATTATTCTATCAATAATATCGATATATATATAATTAATAATTAAATTTCACATTTAATATT
TTTAAAATATTATATAAATGATTATAAACATG
>LE_HBa0142C16_SP6_122549 (trimmed for quality and cloning vector)
GGACTAGGGTCTCCCATGGCCAAAATTTTGGTCTGTTTTGCGGAACAACACAGAATGGCTTGTTCGAAAATCTTTTTTCAAAAATAATGCGGGAACAACT
CCATGTCCCGGACTTGCTCCTCGACTATAATTTCGAAAATTGAAGTTACGTTAGACTTGTCTAAAAGTGTCAAATAAGTATGGGGGTGTTTTGGTAACTT
TGGGTGACGGTATAAAATTTCTATGACCTATTTAACCCCTTCCCAAGTCAAAGCCCTAATACCCAACAAGAAAATCAAAAATCCCAAAAACTTCTTCTCT
TCGAAAACCCCAAAAACTCCATTGGAGACCAAAACACAAGTTCAAGCTAGGGGCTGAATTTCTATAGTTTCTTCTCAAAATTTTCTTGGGTATTCAATCA
ATAAGGTTTGATAATAGTTGATACTTAGTTAATCTTCCATCTAAGGAGTTCAATCAATGATTTTCAAAAGTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951782
Expected error %
0.4586
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0142C16
Clone
Clone name
hba-142c16
LE_HBa0142C16
P142C16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found