Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0107M13_T7_122019

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0107M13_T7_122019
Primer
T7
ID from Seq. Facility
LE_HBa_107_M13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
539 trimmed for vector and quality, 832 raw
Genbank Accession
DU069159
Sequence
>LE_HBa0107M13_T7_122019 (raw untrimmed)
TCGGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCACAATGCCAAATATACAAATTTGACAAAATTCCACAAAAATAGCCAGCCA
AACTATTATATTACTCTATCAAGATATATTACGTATGAATCAACATGTCTAATTTAAAAGCATGACCAGGGTTTATTTAAGTTTAGTTTATCATATGCTT
CATATAAACATCATACTTATATAGGATATCACTCAATTAATTTAAAATGAGTTTCATATCATTTAAGTTGCTGCTCACATAAATCTATTATTAGTATATG
TTATTGAAGAAGAAGGAAGCTGCCGATTGGAACATTCAAAGGAACAAGTCCAACATAGCTGACTGACTTGTTTACTGCAAGTGTTGATGAAGAAGGAAGC
CGAGGATTGGAACATGTCGAAGGAACAGGTCAAACGAAGCTGACTAGCGAGTTTACAACACTGCTGAAGAATTAGTGTCGCACTTGGATTAAACTACCTA
TGTTAATTAGGATTATATTTTGACTAAAATTATATTATGATTAGGATTATATTATGATTAGGATTACTATTATAATTATTAGTTCATTATGACATCTTAT
TCTTATATGGATTTCTCTCTATTTATTTTTAATTGAGTTTCTTATCAACTATGTGTCCTGCTTCCTTCAGTTGTATTATTAGCATATGTTGTTTGAAATT
AAACGTATATAATATCCTTTAATTTTCTTATAGAAGAATTTGTTATATCTTGTTTTTTTTCTTGTTCTTTTACCATTGTTTAATTTATGGGAGCTCCTTG
TTTATTGTGTTCACCTCCTTTTCTAAATTTTA
>LE_HBa0107M13_T7_122019 (trimmed for quality and cloning vector)
AGCTTTCACAATGCCAAATATACAAATTTGACAAAATTCCACAAAAATAGCCAGCCAAACTATTATATTACTCTATCAAGATATATTACGTATGAATCAA
CATGTCTAATTTAAAAGCATGACCAGGGTTTATTTAAGTTTAGTTTATCATATGCTTCATATAAACATCATACTTATATAGGATATCACTCAATTAATTT
AAAATGAGTTTCATATCATTTAAGTTGCTGCTCACATAAATCTATTATTAGTATATGTTATTGAAGAAGAAGGAAGCTGCCGATTGGAACATTCAAAGGA
ACAAGTCCAACATAGCTGACTGACTTGTTTACTGCAAGTGTTGATGAAGAAGGAAGCCGAGGATTGGAACATGTCGAAGGAACAGGTCAAACGAAGCTGA
CTAGCGAGTTTACAACACTGCTGAAGAATTAGTGTCGCACTTGGATTAAACTACCTATGTTAATTAGGATTATATTTTGACTAAAATTATATTATGATTA
GGATTATATTATGATTAGGATTACTATTATAATTATTAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.933229
Expected error %
0.4533
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0107M13
Clone
Clone name
hba-107m13
LE_HBa0107M13
C04HBa0107M13
P107M13
Clone type
BAC
Contamination
none
Estimated length
100,919
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found