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Clone Read LE_HBa0011A02_SP6_120952

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0011A02_SP6_120952
Primer
SP6
ID from Seq. Facility
LE_HBa_011_A02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
525 trimmed for vector and quality, 932 raw
Genbank Accession
DU050098
Sequence
>LE_HBa0011A02_SP6_120952 (raw untrimmed)
AAAAAAAAAAAGTCTTTCGCTAGCTAGTGAGNCAANNNNNNNNNNNNCNNAAANTNANANACAACANAAAANNCAATTNCANNGGNCACCAAGGAGCTCG
GNCTTTGAGATTGAACTTAGTCCACACCAAATAAAGCTTTTGGCATGAACCCTCAGAGCGCACTAATTAATTTAACTCTGTTTCAAAATTCTAGTACTGA
ACTAAATGAACTCTACTCATCTGAATGTCCATGAATCCTAACATCTATGCTAACAAGCTTGACACCTAGTTTCTGCAGGATACATATCAAAATGATTGTA
TGGGCAATTTTTATGCTACTAATTCTTAACATTATTTTCACGGTCCCTATGGAGAGGAACCAAGAAATAAAACAGATATAAACAAACTATAAAAATCACC
TGCACAATAGTGTGAAGAAGCTAAGGTATTGTGAAACAACAGAATTTTCATTTTCTTTCCTAGCTGGTACAGCAGAATTGTTTTTTTTTTTTCCCCCGAC
TTCTCTGGGAAATCACTTAAAAAAAAAAGGGGGGCCTTATTAACGGAGACAGATCCAGGAGGGCTGCACCTATAAGGTTCTCAAGAACCAAGCAACATAC
CCACTGTAATCCCACAAGTGGGGTCTGGGGATGACTACATGAAATCGTTACTGTCCTATTCTCTAGTATTTTTTACAATTCCTAGTTATTACTTGTATAT
GGTATTCTGGTTTCTTCTGTCCTACTCTCGACGAATTTCTAGCTGACTCTTCTCCGTTCATGGTAGCTATCATTTCTCCTCTTTTTTCTTTTTTATTTTT
GCCAGAAAACATCTTAGAGTCTGTTCACCCACCTTATAACAGCGTTATCGCTACCTGGCAAGTTTTAATAATAATAAGATAATTTGGTACTCGCGTAGTT
GATTGAACTTCACAACGATATCTTTATTCAAG
>LE_HBa0011A02_SP6_120952 (trimmed for quality and cloning vector)
CTTTGAGATTGAACTTAGTCCACACCAAATAAAGCTTTTGGCATGAACCCTCAGAGCGCACTAATTAATTTAACTCTGTTTCAAAATTCTAGTACTGAAC
TAAATGAACTCTACTCATCTGAATGTCCATGAATCCTAACATCTATGCTAACAAGCTTGACACCTAGTTTCTGCAGGATACATATCAAAATGATTGTATG
GGCAATTTTTATGCTACTAATTCTTAACATTATTTTCACGGTCCCTATGGAGAGGAACCAAGAAATAAAACAGATATAAACAAACTATAAAAATCACCTG
CACAATAGTGTGAAGAAGCTAAGGTATTGTGAAACAACAGAATTTTCATTTTCTTTCCTAGCTGGTACAGCAGAATTGTTTTTTTTTTTTCCCCCGACTT
CTCTGGGAAATCACTTAAAAAAAAAAGGGGGGCCTTATTAACGGAGACAGATCCAGGAGGGCTGCACCTATAAGGTTCTCAAGAACCAAGCAACATACCC
ACTGTAATCCCACAAGTGGGGTCTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.958232
Expected error %
0.6046
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0011A02
Clone
Clone name
hba-11a2
LE_HBa0011A02
C02HBa0011A02
P011A02
Clone type
BAC
Contamination
none
Estimated length
122,251
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found