Clone Read LE_HBa0054D21_SP6_12088

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0054D21_SP6_12088
Primer
SP6
ID from Seq. Facility
LE_HBa_054_D21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
588 trimmed for vector and quality, 827 raw
Genbank Accession
DU030884
Sequence
>LE_HBa0054D21_SP6_12088 (raw untrimmed)
TTTGGATTTTTTTTTTAAAAAAAAAATTTGGTAGCTATATCAAAGATTTTTTATATACAGTTCTCCTTTTTGGAGAGTAATGGATGAAATTGCTATAAAT
AATTTCCTTGTATCAATTAAAGTAGTGATAGGAATGATTTCATGATGGTGAAGAACTTTGGTGGTGCCATATTTATGTTGTAAAGTTGAAAGAAAATTAA
TAACTAAAAATACACATTTATTATTTGTGTTGGTTCTCACTCTATTACAGAGAGTGAGATACACTCACTATACCACAATGTGCCACGTAAGCATCTAGGG
AGTAAATTATTTTAGTTTTAAATAATTCAGGGAGTGATAGGACATCCGTGAAGTTGAAATATATAGTTGAGATTTCGGGTATAGATTGGGGGGCTTTAGA
CCATTGGATTTGATCTAAGTATCAATTTCAATTTTTATAATGTAATTTGACTTGACACGAAATTTATGACGAAGAAAAAAAGACTAAGTACTTCCACTGT
CAAATAATATTGGTCCACTATTGTTTTACACAATTAGTAAGAAACTATACCCTTTGAATTTAATAAATACAATCTCTTGAAAAATGTAATAGTGAAATGA
CTATAATTAATGATAAAAGTACATCACGAACTAAGTGTAAAATTATCAATGCATTTTATAAAGTAGACAAGTATTGTTGGACATCCTAAAATAGTATCAT
TTGACTACTTTTATTGACATCACGGAGTATCTCCTGCGGACCCTCCTTTTTTTTATACTACACTTCCCACCTACCAAACTACAAAAGTATAACTCCCCCA
TTTTTATGGTAGAACCAATCCGACCTT
>LE_HBa0054D21_SP6_12088 (trimmed for quality and cloning vector)
TTTTTTTTAAAAAAAAAATTTGGTAGCTATATCAAAGATTTTTTATATACAGTTCTCCTTTTTGGAGAGTAATGGATGAAATTGCTATAAATAATTTCCT
TGTATCAATTAAAGTAGTGATAGGAATGATTTCATGATGGTGAAGAACTTTGGTGGTGCCATATTTATGTTGTAAAGTTGAAAGAAAATTAATAACTAAA
AATACACATTTATTATTTGTGTTGGTTCTCACTCTATTACAGAGAGTGAGATACACTCACTATACCACAATGTGCCACGTAAGCATCTAGGGAGTAAATT
ATTTTAGTTTTAAATAATTCAGGGAGTGATAGGACATCCGTGAAGTTGAAATATATAGTTGAGATTTCGGGTATAGATTGGGGGGCTTTAGACCATTGGA
TTTGATCTAAGTATCAATTTCAATTTTTATAATGTAATTTGACTTGACACGAAATTTATGACGAAGAAAAAAAGACTAAGTACTTCCACTGTCAAATAAT
ATTGGTCCACTATTGTTTTACACAATTAGTAAGAAACTATACCCTTTGAATTTAATAAATACAATCTCTTGAAAAATGTAATAGTGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.912787
Expected error %
0.563735
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0054D21
Clone
Clone name
hba-54d21
LE_HBa0054D21
P054D21
Clone type
BAC
Contamination
none
Estimated length
89,284
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found