Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0191O01_T7_114713

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0191O01_T7_114713
Primer
T7
ID from Seq. Facility
LE_HBa_191_O01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 934 raw
Sequence
>LE_HBa0191O01_T7_114713 (raw untrimmed)
TTTTAAAACGGGGCCGAGGGGATCTCGAGAGTCGATCGGCGAGCTGAGTGACTTTTATGGAAAGAGGAAGCTGCATTTCCTCCTTTTGCCGGTGAATACG
TTATTTTGGAAACCTTTCTAGAGGCTTCCGATTACTTTGCTAAAATGAAAATCCTCACGATTTTGGTATAGAATACATGTAAACTGTTCCCCAACGAAGC
TTTTGTACTGATAATTATAAATAGGGGGGGGGGGGGGGGGGGTGAATGAAAAGGAATTAGGGGGGGGGATCCAATTTCTTTTACATTGAGTATCTAATGT
CCTCTGATAGGATAGCTTTTTGTCCTCTGAAGAAGAGAATAAACTGAGTTGCGTTGACCTTATTACATATTTTTTAGGAAAATATATGTTAAAACAACAT
AAAAAAAAAATATAGTTATATGTCGGAGTCAACCCTATTTTGTTGGGGGGGGGGGGGAGAAATAGCTTGGAAGTGGACGTCATTCAATAACTTTGTGAAA
GGAAAAAGCACGACTTTACACAAAAAAAACGATCTGCATCCAATCCCCCTTTTATCGAGAGAGGAAAAAAAAGAAAGAGCCCGACACAGAGTCCCTCACC
AAAAGATGTTATGCTAGAAAGGTCAACGGGAAGCCGCTCTGAAAAATCGCAGTAAAGGGCGTGGACTGTGGGATTTTCCCCTTAGAGGGACCGGTAGCCC
TTGCGAATACCCCTATCGCCCGGTACTTTTTTTTATCTCTTTTTTTTTTCTTTTCCACATCCCCCGCCTTTCCCCCAAAGGTCTAAATTCGGGGGCTCCT
TTAAAGGCTTCCAAATAACGGGTTAAGCGACCCCCCACCCCCCAAAACTCGCATAATGGATCAAGGGCTTCACATGGCGGCCCACCTCCCCATAAAGAAT
GATTTTATCCCCTTTTAGCCTTGCGCATCCCCCC
>LE_HBa0191O01_T7_114713 (trimmed for quality and cloning vector)
GGGGGGGGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.7603
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0191O01
Clone
Clone name
hba-191o1
LE_HBa0191O01
C12HBa0191O01
P191O01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found