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Clone Read LE_HBa0188K08_SP6_113766

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0188K08_SP6_113766
Primer
SP6
ID from Seq. Facility
LE_HBa_188_K08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
596 trimmed for vector and quality, 810 raw
Genbank Accession
Sequence
>LE_HBa0188K08_SP6_113766 (raw untrimmed)
GGGCCCGGTTCCCTTCTTCCCACCATGAAATGCACCTTTAATCCAACCAGAAAGCATGTTTGATTCAGGTCTTAGTTGTATCCATTGGTCATATGTTATG
ACCTCAGACGGAAAAGAGTCCGAGTCAATGGTACTGCAACAAAGAAGTAATTAGCAATATTCATAAGATGCAAGTTTAATGATCACAAGAGAAACATAAT
ATTGGAACAACATAAAAGATGTCACTCACAAGTTCATCTAACCAGTTCATAATTATTGTTTATTTTGTTTACCATGTAATCTCCATCAAGTGTTTATGTT
TATTTTGAATTGTTTGCATATTTTGTTTAATTTTCAGGAGTTCTATCAGTTCAGATTGAAGAGTGTCATCATTAAAAACTATAGGCTTTATCTTATCATG
ATTTATGCAACTCAACTTTTTTAAGAGTACATAACTATATTCTACGGTCAATACTCCTATTCGAATGACTTCACCAGTTTAACCTACGAAATAGAAGGGA
GTACAAGAACCCAATATATTTTCTTTTTATAAAGGTATGAACAACCAATCGTCTATGATAACAGATATCTCATAGTTGCTCAGAAATCCAGAAAGGAAAT
AATATCCCCTTAATTGCATAGAAGTGCTTTCTATCCCTTCAAAAGCTCGTCAGTTCCTTTCTCGCCAATAGTCATAATAAATCAATGGAAAGGAATCCAT
GGCCAACCTCCCATAAGTGATAACTTCTACCCCTAAAAAGTAATAATATATTCCTTGTGGGCCCTTTTATTTGCTCTCTGGTTCGAATTTTTCCTTATTC
ACCGATTTCT
>LE_HBa0188K08_SP6_113766 (trimmed for quality and cloning vector)
CACCATGAAATGCACCTTTAATCCAACCAGAAAGCATGTTTGATTCAGGTCTTAGTTGTATCCATTGGTCATATGTTATGACCTCAGACGGAAAAGAGTC
CGAGTCAATGGTACTGCAACAAAGAAGTAATTAGCAATATTCATAAGATGCAAGTTTAATGATCACAAGAGAAACATAATATTGGAACAACATAAAAGAT
GTCACTCACAAGTTCATCTAACCAGTTCATAATTATTGTTTATTTTGTTTACCATGTAATCTCCATCAAGTGTTTATGTTTATTTTGAATTGTTTGCATA
TTTTGTTTAATTTTCAGGAGTTCTATCAGTTCAGATTGAAGAGTGTCATCATTAAAAACTATAGGCTTTATCTTATCATGATTTATGCAACTCAACTTTT
TTAAGAGTACATAACTATATTCTACGGTCAATACTCCTATTCGAATGACTTCACCAGTTTAACCTACGAAATAGAAGGGAGTACAAGAACCCAATATATT
TTCTTTTTATAAAGGTATGAACAACCAATCGTCTATGATAACAGATATCTCATAGTTGCTCAGAAATCCAGAAAGGAAATAATATCCCCTTAATTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.936809
Expected error %
0.0492
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0188K08
Clone
Clone name
hba-188k8
LE_HBa0188K08
P188K08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found