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Clone Read LE_HBa0181H15_T7_112869

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0181H15_T7_112869
Primer
T7
ID from Seq. Facility
LE_HBa_181_H15-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 914 raw
Sequence
>LE_HBa0181H15_T7_112869 (raw untrimmed)
TGGGTCCTGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTAGTTACCTTTTTGGTAATCTTCCCTTTATGTTAACTCTAAGAAATATACTA
TGCTCACACAAAATCTTGATATCTCTTGCGATCTCCATGCGTGCTCGAACCTGGAAGCACTGCAGAGAAGAATTATCCACCTACCTGGGCTGACTAGCCT
AGATGATGCTAAGTAGAAAGACGTTGTTATTTGAATATCATATTCTCGCACCACTCATTCTATCATATATATGTAGTTGATTTGACTAATTTAATGAATT
AACTAGTGCCTGATGTGGATTTTGTATGTCCCGAGGATATGTACAAGTTCCCAATTAAATGAAATAAACACTCATCTTCACAGAATGAAAAATCTGAGAA
GTTATTTTATATTATCTCTAAATTATAACACAGAAAAGGACGTGAAAAAAAGGGAAGATTAGATTTGACTAAAGATAATTTCTATAAGACTAATACCCTC
TCTATTATTTCATGCTTGACCAATCTCTGACCTACATATGTTTTTTTCGTATTGTCTTTATTTGTAACTTCTATTTTATGCACTCAATCATTCATCTTTA
CTAATATCATTTCTACTTTCTATATTATAACGATTCTTACATGATAATCGCTCTTGTCTTTATTTATAACTTAGTTTTCTTTGATAATTTATTCTTCTTG
ATTTTTTTGTTATTTCTCTTTTTTTTTTTCTTATTTATTTTGTATTTTTTTTTCACTTTTTATCTTTTTTTTCTCCTATTTTATGTTTTAAATATCTTTA
ATATGTTATATTTATTACATTATTCCTCATTTCGAGTGTTTATTTTATTTATTTATATAATATATTTTTTATTTAATTATTTATATACCTTTAAATAATT
TTCTTATTGTGTTC
>LE_HBa0181H15_T7_112869 (trimmed for quality and cloning vector)
AGCTTG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
not recorded
Expected error %
0.7391
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0181H15
Clone
Clone name
hba-181h15
LE_HBa0181H15
P181H15
Clone type
BAC
Contamination
none
Estimated length
81,220
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found