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Clone Read LE_HBa0181G10_SP6_112810

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0181G10_SP6_112810
Primer
SP6
ID from Seq. Facility
LE_HBa_181_G10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
662 trimmed for vector and quality, 1041 raw
Genbank Accession
Sequence
>LE_HBa0181G10_SP6_112810 (raw untrimmed)
CCCGGCTTTACTTCCTAAAACTTCTTCTAAGACAGAAATTACGCTAAAGAAATTTTAGACCTTCAAACAAATTTAAACCATAAAAATATAAGTTTTTAAA
ACTATACTTGGACATATACCTTATTAGGAAAAAAGATTAAAGTCTAATGAATTAGTCAAACAGACTTTTTAAAGACAAATTTTTAAAATTTAATCCAAAA
CTGATGATGCTAAGACAACAAAAGCAAAAGACAAGAAATCGTGGTCAGGGGCATTTTAGACTTTCAAGCAAGGGTATTTTTGGTATTAAGAAAACCTGTA
AAAGAACCTTGCAAATGGCTTCAGTCATCGGTAAAGACGAAACACAAAAATGTACTTATTAGTTACATCTATGAACAGTTGTTTCTTCTTGTTTTTAAGT
AGCGATAATTTTTTTCTATTTTTCATCTTCCTGAAGAAGAAAAAAAAAACGTAAAAGTTGTTTCATCAATGGCTCATTTTTGGAACCAAACTAATGCTCT
GTTCCGGAAGAATCTCGTGTATCACGTTAGTTCAAAAAATTCTGTTTCTGTTTTCAATTTTGATTTTATTTTTGTTAAATTTCATGGATTTGATTTTGAA
TTTTTGAGTTTTGCAGAGACGGCATGCGAGATCACACTTGAAGGTGATTTTGTTCCCCGCAATTCTGTTTATACTTCTAGGGGCTTTACAAAGCTACTCC
AACAAGGCAGATAGGGGAGATAAAGTAAAGCCCCGCGTTGGAACTGAATTTCCTCCTTTATTTGCAATTCCTTCTCCTCCCTTTCCTGCGGGGAAGACCG
ATTCAAGGCCGTTACTGGGCTGCCTGATGCATCTGGAAAGGAAACGGTTCCTGCCCCGCCACTGTTCTTTTCCCGGGGAACAACAGAACGCTTGGAAAAA
AGAAAACGTTTTTTGCACTTTTATTACTTTTAGCTAGGGTTTATGGGAAATTTGTAACTTTCTTTCTTTAATTAATTTGGCCGTAAAATTTAAGGAGGTT
TGAACAACCCCCCCACCTTTTTTTTTTTGGGACTTCCTAAA
>LE_HBa0181G10_SP6_112810 (trimmed for quality and cloning vector)
CTAAGACAGAAATTACGCTAAAGAAATTTTAGACCTTCAAACAAATTTAAACCATAAAAATATAAGTTTTTAAAACTATACTTGGACATATACCTTATTA
GGAAAAAAGATTAAAGTCTAATGAATTAGTCAAACAGACTTTTTAAAGACAAATTTTTAAAATTTAATCCAAAACTGATGATGCTAAGACAACAAAAGCA
AAAGACAAGAAATCGTGGTCAGGGGCATTTTAGACTTTCAAGCAAGGGTATTTTTGGTATTAAGAAAACCTGTAAAAGAACCTTGCAAATGGCTTCAGTC
ATCGGTAAAGACGAAACACAAAAATGTACTTATTAGTTACATCTATGAACAGTTGTTTCTTCTTGTTTTTAAGTAGCGATAATTTTTTTCTATTTTTCAT
CTTCCTGAAGAAGAAAAAAAAAACGTAAAAGTTGTTTCATCAATGGCTCATTTTTGGAACCAAACTAATGCTCTGTTCCGGAAGAATCTCGTGTATCACG
TTAGTTCAAAAAATTCTGTTTCTGTTTTCAATTTTGATTTTATTTTTGTTAAATTTCATGGATTTGATTTTGAATTTTTGAGTTTTGCAGAGACGGCATG
CGAGATCACACTTGAAGGTGATTTTGTTCCCCGCAATTCTGTTTATACTTCTAGGGGCTTTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.924979
Expected error %
0.2578
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0181G10
Clone
Clone name
hba-181g10
LE_HBa0181G10
C06HBa0181G10
P181G10
Clone type
BAC
Contamination
none
Estimated length
81,246
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found