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Clone Read LE_HBa0131H06_T7_112083

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0131H06_T7_112083
Primer
T7
ID from Seq. Facility
LE_HBa_131_H06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
678 trimmed for vector and quality, 914 raw
Genbank Accession
DU069441
Sequence
>LE_HBa0131H06_T7_112083 (raw untrimmed)
ATAAACTGGGTACCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAATCATATGGATAAGGTGAACCCTTTTAAGGCCCTACCAGGAGATTT
AGTAAGTTGCTCTAGCCTTACATTAACTGAGTTTTTGAGGAGTGAGTCCAAATATGCAAAGATCGCACAGAAGTTGGAGAAAATCTTTGGCAACAATAAG
GCTTGGAGTACTATAAAGTTGGACACTGGGAGAAACACCTTTCAGTGCAAGCTACAAACAATCCAGTCGCAGATGAAATTCGTGAAGAGATGGCTCAAAT
AAGAGCTTATCTTGGGTTGGTATGGAAACATGTCAATAGAGGTGCAGAAAAGGTAGATATGGTGAATGACAAGACAACACCACCACCGCTAGCGGATGAC
AACTATTATGAAGAGGATATGTATGCACTGATGGTCAGAATGGGGGTTTCCAACCGAAAGCCCAAGGCTCCAATCCAGAGAATTGGCGTCAAGGTCAAGG
AAATCATGGCCGGAACTATAGGAATTAAAAAAAGAGAAGGCCAGTATGTTAGAGATGGAAACTACAACCGCAACAACAACTTCAACAGGGGTAACTATGG
TAACAGAAATGATCGAAGTGGGCCCTATTTTCCACCTCAAAATCGGGAAGTTTCTCCTAGATATTGTAGAGTTAGTATGGCGTGAGTTGAATATATGTTG
CACAAGATGATGAGAAAGGTTGATTCTTATGAATAACCCACCCAATAATTAAAAAGGTTGATTTACCTACTCCCATCCAAAGGATGATCCCCATTTGGTC
TCGATAAGGCACTCGGAATCACAATGCGCAATTTTTGTCATGCTAGGAATGACTAATAAAAGGCACTCTTCCATGTATTTCACCAAAATCTTTAACTAAT
TCTCTTGCAGGTAA
>LE_HBa0131H06_T7_112083 (trimmed for quality and cloning vector)
AGCTTAATCATATGGATAAGGTGAACCCTTTTAAGGCCCTACCAGGAGATTTAGTAAGTTGCTCTAGCCTTACATTAACTGAGTTTTTGAGGAGTGAGTC
CAAATATGCAAAGATCGCACAGAAGTTGGAGAAAATCTTTGGCAACAATAAGGCTTGGAGTACTATAAAGTTGGACACTGGGAGAAACACCTTTCAGTGC
AAGCTACAAACAATCCAGTCGCAGATGAAATTCGTGAAGAGATGGCTCAAATAAGAGCTTATCTTGGGTTGGTATGGAAACATGTCAATAGAGGTGCAGA
AAAGGTAGATATGGTGAATGACAAGACAACACCACCACCGCTAGCGGATGACAACTATTATGAAGAGGATATGTATGCACTGATGGTCAGAATGGGGGTT
TCCAACCGAAAGCCCAAGGCTCCAATCCAGAGAATTGGCGTCAAGGTCAAGGAAATCATGGCCGGAACTATAGGAATTAAAAAAAGAGAAGGCCAGTATG
TTAGAGATGGAAACTACAACCGCAACAACAACTTCAACAGGGGTAACTATGGTAACAGAAATGATCGAAGTGGGCCCTATTTTCCACCTCAAAATCGGGA
AGTTTCTCCTAGATATTGTAGAGTTAGTATGGCGTGAGTTGAATATATGTTGCACAAGATGATGAGAAAGGTTGATTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.967301
Expected error %
0.7256
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38730.1| Score 71 E Value 4e-25 Identity 51.40% Align. Length 474bp (69.91%) Frame 1
putative reverse transcriptase [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0131H06
Clone
Clone name
hba-131h6
LE_HBa0131H06
P131H06
Clone type
BAC
Contamination
none
Estimated length
97,125
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found