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Clone Read LE_HBa0131F15_T7_112005

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0131F15_T7_112005
Primer
T7
ID from Seq. Facility
LE_HBa_131_F15-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
274 trimmed for vector and quality, 925 raw
Sequence
>LE_HBa0131F15_T7_112005 (raw untrimmed)
CAAACCGGGTCCCGGGGGAACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGACGGCGATGTATTTAGCCACCATTAAAGGTCTCATTGTATGAAAAAA
AGATTATAGATTCTCCCCTTAGGTGTTTGTAATAGATATAAGGAAGATAAATATTTAGAAAGTGAATGATTAATGTGGTGATTTTGTTAATGGAGATTAT
TGTTATAAGTGATTTAAGGTAAATTTTTTATGTGGGTTGGGTATGATTTTTTGTAAAATTTAGAGTGAAGTGTTTTGAGTTTTTTTAATTTTATTTTTAG
AATTATTTTTTGTGTGGGAAAATGAAGGGTAGGTTTAGAGTTTATTAAGTATAAAAGAATGAAGATTGTAGAAATAATATATTAATAATAATTAAATTTT
AGATTTGAGTTTTGGATATTTTAATTTTTATATGAAAATTTAAATGAAAATAAAAAGAATAGGAATTAAGTATAATTTTTAAGAAATTATATGTTTAGTG
TTTGTTTGATTGAATTTATGATATTTTTTAATATTGTGATTTAATAGAATAATTATGGGTGATGGTTTTTATTGTGGAAGAAAAGAGTTTAATGATATTT
ATGATTTGAAGTAATAGTTAATAAAGTATATTTTTTAAATGATAAATGGTTTTTATATGATGATTATTAGTGTTATTGTATATTTATAATGATAAATGGT
TGGAAATGTATTGATAAAGGTATAAATGTAGTTTATTAAGGTGTATAAATTGTTAGTTAGTTGTGGGTTAATTTATAGTATGTGTTTGTATTGGGAGATG
TATTGGTGTATTTTAAGTATATTTGTGGTTATGTTTATGTGTAATATTAAAATTTTAAATATTTATTAATAGTTGTAATTGGTGTTGGGAATGGAGATAT
TTATTTATTTTTATGTTTGTTAGTG
>LE_HBa0131F15_T7_112005 (trimmed for quality and cloning vector)
AGCTTGACGGCGATGTATTTAGCCACCATTAAAGGTCTCATTGTATGAAAAAAAGATTATAGATTCTCCCCTTAGGTGTTTGTAATAGATATAAGGAAGA
TAAATATTTAGAAAGTGAATGATTAATGTGGTGATTTTGTTAATGGAGATTATTGTTATAAGTGATTTAAGGTAAATTTTTTATGTGGGTTGGGTATGAT
TTTTTGTAAAATTTAGAGTGAAGTGTTTTGAGTTTTTTTAATTTTATTTTTAGAATTATTTTTTGTGTGGGAAA

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.862401
Expected error %
7.2467
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0131F15
Clone
Clone name
hba-131f15
LE_HBa0131F15
C01HBa0131F15
P131F15
Clone type
BAC
Contamination
none
Estimated length
101,841
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found