Clone Read LE_HBa0051B06_T7_11195

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0051B06_T7_11195
Primer
T7
ID from Seq. Facility
LE_HBa_051_B06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
827 trimmed for vector and quality, 921 raw
Genbank Accession
DU030101
Sequence
>LE_HBa0051B06_T7_11195 (raw untrimmed)
GGGCCTGGTACCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTACCCTTCTTTACCACATGAGATTTCTGTTCTCGTTGAGCTCATCTTA
GGACACCTGCGTTATCTTTTAAAAGATGTGCCGCCCAAGCGAAACTCCCCACCTGACAATGTCTTCTGCACGGATCGGCCCGCGAAGTGAGCCTTTGGTC
CAAAAAGAGGGGCAGTGCCCCACTTCCGATTCACGGAATAAGTAAAATAACGTTTAAAGTAGTGGTATTTCACTTTCGCCTTTCGACTCCCACTTATATT
ACACCTCTCAAGTCATTTGATAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTTCTAAGCCCGTTCGCTTGGCTGTGGTTT
CGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGATTACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT
TACTCCTGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGTGCAGAAATCACATTGCGTAAACATCCGTTGCGACCATCGC
AATGCTTTGTTTAAATTAAACAGTCGGATTCCCCTTGTCCGTACAAGTTCTGAGTTGTTTGTTCGACACCCGAAGAAGGCCCCCGAAGGAACCGTTCCTA
GTCCTTCCCCCGTCCGGCACGCGGCAACACGCTCTCGCCGTGGGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTTTGGGACTTGGATCCCCGTGCA
CAGCCCTCCAAGCCAATCCTTTTCCAAAGGTACGGATCAATTTTGCCAACTTTCCTTGCTACATTGTTCATCGACCAGAGGTTGTCACCCTTGGAGACTG
ATGCGGTTATGAGTACGATCG
>LE_HBa0051B06_T7_11195 (trimmed for quality and cloning vector)
AGCTTTTACCCTTCTTTACCACATGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAAAAGATGTGCCGCCCAAGCGAAACT
CCCCACCTGACAATGTCTTCTGCACGGATCGGCCCGCGAAGTGAGCCTTTGGTCCAAAAAGAGGGGCAGTGCCCCACTTCCGATTCACGGAATAAGTAAA
ATAACGTTTAAAGTAGTGGTATTTCACTTTCGCCTTTCGACTCCCACTTATATTACACCTCTCAAGTCATTTGATAAAGTCGGACTAGAGTCAAGCTCAA
CAGGGTCTTCTTTCCCCGCTGATTCTTCTAAGCCCGTTCGCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCA
TGCACGTCACTAATTAGATTACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC
ATTCAGAGCACTGTGCAGAAATCACATTGCGTAAACATCCGTTGCGACCATCGCAATGCTTTGTTTAAATTAAACAGTCGGATTCCCCTTGTCCGTACAA
GTTCTGAGTTGTTTGTTCGACACCCGAAGAAGGCCCCCGAAGGAACCGTTCCTAGTCCTTCCCCCGTCCGGCACGCGGCAACACGCTCTCGCCGTGGGAG
CAGCTCGAGCAGTCCACCGACAGCCGACGGGTTTGGGACTTGGATCCCCGTGCACAGCCCTCCAAGCCAATCCTTTTCCAAAGGTACGGATCAATTTTGC
CAACTTTCCTTGCTACATTGTTCATCG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.986322
Expected error %
0.218777
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
pir||T02995 Score 269 E Value 8e-71 Identity 22.80% Align. Length 680bp (82.22%) Frame 1
unspecific monooxygenase (EC 1.14.14.1) - common tobacco dbj|BAA10929.1| cytochrome P450 like_TBP [Nicotiana tabacum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
pir||T02955 Score 233 E Value 5e-60 Identity 20.50% Align. Length 692bp (83.68%) Frame 1
probable cytochrome P450 monooxygenase - maize (fragment)
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0051B06
Clone
Clone name
hba-51b6
LE_HBa0051B06
C02HBa0051B06
P051B06
Clone type
BAC
Contamination
none
Estimated length
79,038
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found