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Clone Read LE_HBa0131C09_SP6_111839

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0131C09_SP6_111839
Primer
SP6
ID from Seq. Facility
LE_HBa_131_C09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
531 trimmed for vector and quality, 955 raw
Genbank Accession
DU069297
Sequence
>LE_HBa0131C09_SP6_111839 (raw untrimmed)
TCCCGGTTTTTCCTCAGGTGTTATGGGACTTAATTCGTAGACCAAGAGTGATCCTTTTAAAGAAGTCTATATGTCCCGTTACAAAAGCAATATATGATAG
GGGTAGATAGATGAACTTGTTGTAATAGTAATGATAATATGTTAAAGAATTGGAGCTCCTCATTAAGACAAGACAATGAAGGTTGATTTTGCTTAGTTTG
AAGATTTTCAGTTTTGCCCCCTCAGGCCACATTTCCTATTGGTAGTTACTTCTTTTCAATAATTCTAGCAGGGTTTCTGCATTCAACGGTTAACAAGTGA
TCTCCTCTTTATTTAATTTTGATCTGCCGGTGCAATTAGCATCGAACTATCTATTCCTTTCTTTTCACTTTATGCTGTACAAATGAATTGATTAGCTAAT
AAATTAGGTGAATATATAATTATTTACTTTACCTTCTTACTTCTTTTGATGGCCTTTGCAATATTTTTTGTTACTCAAATGTGTTTTTTTGCTATTTAAT
ATATCAAATGAGTTTTTTTTAGGTAATCAATGCTTCAGCAAATAAAAGAACTCATTTGATGCAGAATGTCTTTATTGGCATGACATATGAGTTCAATTGA
AAGTAACCATGGTGAATGAGGATTCATATCATTAATCACTACTTGGTTCGAATTGAAGCGTAGTGATGCTGGCTATTTAGGTGTCCATTTTCAGAGGGTT
TTTCGTGCAGCTCTTTTGCTATATTAGAAGGTTTGTAACTATCTCGGCTTGGGTGCCCTCGCACTCACCGTCCCTTCTTTCATCGTCAAATATCGTTAAT
AGAATATTTAATCAAACTCCTCTTCATCGCGACGTCTACTCAATTACACCCCCTTTATTTTATTTTCATCTTTTTTTGGTCTCTTAATGTTTTATTGTGT
CGTACCTTTACTCTGATTCTTCGTCGGCTGGGTGGCTGGGCCGTGACGAGGGTCT
>LE_HBa0131C09_SP6_111839 (trimmed for quality and cloning vector)
TTAATTCGTAGACCAAGAGTGATCCTTTTAAAGAAGTCTATATGTCCCGTTACAAAAGCAATATATGATAGGGGTAGATAGATGAACTTGTTGTAATAGT
AATGATAATATGTTAAAGAATTGGAGCTCCTCATTAAGACAAGACAATGAAGGTTGATTTTGCTTAGTTTGAAGATTTTCAGTTTTGCCCCCTCAGGCCA
CATTTCCTATTGGTAGTTACTTCTTTTCAATAATTCTAGCAGGGTTTCTGCATTCAACGGTTAACAAGTGATCTCCTCTTTATTTAATTTTGATCTGCCG
GTGCAATTAGCATCGAACTATCTATTCCTTTCTTTTCACTTTATGCTGTACAAATGAATTGATTAGCTAATAAATTAGGTGAATATATAATTATTTACTT
TACCTTCTTACTTCTTTTGATGGCCTTTGCAATATTTTTTGTTACTCAAATGTGTTTTTTTGCTATTTAATATATCAAATGAGTTTTTTTTAGGTAATCA
ATGCTTCAGCAAATAAAAGAACTCATTTGAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.928273
Expected error %
0.2821
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0131C09
Clone
Clone name
hba-131c9
LE_HBa0131C09
P131C09
Clone type
BAC
Contamination
none
Estimated length
42,479
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found