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Clone Read LE_HBa0198J02_SP6_111402

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0198J02_SP6_111402
Primer
SP6
ID from Seq. Facility
LE_HBa_198_J02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
712 trimmed for vector and quality, 764 raw
Genbank Accession
DU096617
Sequence
>LE_HBa0198J02_SP6_111402 (raw untrimmed)
GCTTTCCGAGAATGAAACTATTGTTAAGTTGTAAATCGAACATGATGGTAATCTAACCTATGTGATTGGATATTCCATGAATTAGGTTCATATGATTAAT
AACAAGTCATCATTTGATTTGTGCACTATAAATTTTTGTCTCATTTGTGATCTATTATGGCGTGCATATAGTGCAAATCAGCAAGGAAAGAGAGGTTGAG
TTGTGAACTCTTAATCTATAATCATATCCTTTATATGTGGTGTATTGCTCTGCAGAGTACACTTGATAAGTGAACCTATATGAGTGTCGAGTGGTGTCGT
TTCTATAAAATTGTGACGGATTTCTAAAGCATTCATGAATACCAGGACACGTGCATAGCCTCTTAGCGCAAAACCGCGATAATGACAAAGAGAGTACAAG
TATAATGTGATAGAATAAGACTCTAAGCTTACAACAGAACTTTTGGTTCATAGAAGTTTTAAACTTCACCATTTGTTTTGAAAGTTTAATCTTATTTTAT
CTAGGTCTGGTTTATAGTCTACAAGACACCAGATTCGACACATTATTCTTTCTTTTGAAAATCCAATAATAATTATCTTTTATGTATTTTTTAGTTACTA
CTCCCTCCGTCCGGTATTGTTTGTCATGGTTTCTATTTTCAGAGTCAAACTATAAAAACTTTGACTAACATTATAAGATGCATTTTTTCATCATATTGAT
ATGCAAAAAATTGTAATTTATAGTACTTTTTCATATAGTTTTAGAATATTTAAATTTTTTGTTT
>LE_HBa0198J02_SP6_111402 (trimmed for quality and cloning vector)
ATTGTTAAGTTGTAAATCGAACATGATGGTAATCTAACCTATGTGATTGGATATTCCATGAATTAGGTTCATATGATTAATAACAAGTCATCATTTGATT
TGTGCACTATAAATTTTTGTCTCATTTGTGATCTATTATGGCGTGCATATAGTGCAAATCAGCAAGGAAAGAGAGGTTGAGTTGTGAACTCTTAATCTAT
AATCATATCCTTTATATGTGGTGTATTGCTCTGCAGAGTACACTTGATAAGTGAACCTATATGAGTGTCGAGTGGTGTCGTTTCTATAAAATTGTGACGG
ATTTCTAAAGCATTCATGAATACCAGGACACGTGCATAGCCTCTTAGCGCAAAACCGCGATAATGACAAAGAGAGTACAAGTATAATGTGATAGAATAAG
ACTCTAAGCTTACAACAGAACTTTTGGTTCATAGAAGTTTTAAACTTCACCATTTGTTTTGAAAGTTTAATCTTATTTTATCTAGGTCTGGTTTATAGTC
TACAAGACACCAGATTCGACACATTATTCTTTCTTTTGAAAATCCAATAATAATTATCTTTTATGTATTTTTTAGTTACTACTCCCTCCGTCCGGTATTG
TTTGTCATGGTTTCTATTTTCAGAGTCAAACTATAAAAACTTTGACTAACATTATAAGATGCATTTTTTCATCATATTGATATGCAAAAAATTGTAATTT
ATAGTACTTTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.939055
Expected error %
0.064532
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0198J02
Clone
Clone name
hba-198j2
LE_HBa0198J02
C08HBa0198J02
P198J02
Clone type
BAC
Contamination
none
Estimated length
95,368
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found