Clone Read LE_HBa0198E12_SP6_111182

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0198E12_SP6_111182
Primer
SP6
ID from Seq. Facility
LE_HBa_198_E12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
640 trimmed for vector and quality, 825 raw
Genbank Accession
Sequence
>LE_HBa0198E12_SP6_111182 (raw untrimmed)
GTTTTGAATTTTGAAGTGAGAACCTCATGGTTTTCAGAGGATAATAAAGTTATTTGAGAGGTAATGGCCAGTAAATGAGTAAGTAGTACCTAAGTTGTGA
AGTGAAAATGTTATAGTAATTTGATATGAAAATCAAGAGGCGATGATTGACTATTTGTCATAAGGTCCTAGTGGATGAATGTTTTTGAGTTGATATAGTA
GGCGAACAATCATATTGATATTCGAGTTTAGTTATGAACATTAAGCTTGAATTTGAGATGAGTGTCAAAATTCAAAAAATGGTAACATGAGGTTGATGAA
GTGAGTCATGAGATTTGCTCTAGAAGACTTGTCATAGAGTAGGTGAGAAATTGAGGTGATTAGTTGCAATATATATGAGTGATGCAATCGAGAGACCCTA
ACCTTTAGATAAGGACATCGAAGTGTGACTAAGTCACAAGAGTAGTACGAGCATAAAATTTTTTACCAAGAGGGTATATAATCAGAAGAGGTTAAGAGAA
ACCCCTTAGAAAGAGGTCTTAGTACCTAATTATAGAGAGTTCATTAGCCATGAGATAAACCTCTCCCAAGTGTTAGCGTAAAAGAGGATGTGGACAAGTT
TAGAGATGTGGAATATGTCCAATAACATTCAAATGTTAGATTTAGACCTAAGGGGGGATGATAAGATGAGTAAATCAAGTCCAATTTGTTGAGAATTTCT
AAAGGAGCCTGGTAATAGGAGTGCATAGAGTTATTAAAAATTACTAACCTTGAATTGTGATGGTTGCCTAAACCTTTAGGTGGGTTTCTTGGAATAGGCA
AGTGTGGTGGGTTAGAAAGTTATTT
>LE_HBa0198E12_SP6_111182 (trimmed for quality and cloning vector)
GGTTTTCAGAGGATAATAAAGTTATTTGAGAGGTAATGGCCAGTAAATGAGTAAGTAGTACCTAAGTTGTGAAGTGAAAATGTTATAGTAATTTGATATG
AAAATCAAGAGGCGATGATTGACTATTTGTCATAAGGTCCTAGTGGATGAATGTTTTTGAGTTGATATAGTAGGCGAACAATCATATTGATATTCGAGTT
TAGTTATGAACATTAAGCTTGAATTTGAGATGAGTGTCAAAATTCAAAAAATGGTAACATGAGGTTGATGAAGTGAGTCATGAGATTTGCTCTAGAAGAC
TTGTCATAGAGTAGGTGAGAAATTGAGGTGATTAGTTGCAATATATATGAGTGATGCAATCGAGAGACCCTAACCTTTAGATAAGGACATCGAAGTGTGA
CTAAGTCACAAGAGTAGTACGAGCATAAAATTTTTTACCAAGAGGGTATATAATCAGAAGAGGTTAAGAGAAACCCCTTAGAAAGAGGTCTTAGTACCTA
ATTATAGAGAGTTCATTAGCCATGAGATAAACCTCTCCCAAGTGTTAGCGTAAAAGAGGATGTGGACAAGTTTAGAGATGTGGAATATGTCCAATAACAT
TCAAATGTTAGATTTAGACCTAAGGGGGGATGATAAGATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.930799
Expected error %
0.0827118
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0198E12
Clone
Clone name
hba-198e12
LE_HBa0198E12
P198E12
Clone type
BAC
Contamination
none
Estimated length
110,221
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found