Clone Read LE_HBa0197O10_T7_110891

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0197O10_T7_110891
Primer
T7
ID from Seq. Facility
LE_HBa_197_O10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 841 raw
Sequence
>LE_HBa0197O10_T7_110891 (raw untrimmed)
AAAGAGAGTAGGGATTAGANAAGAGAGAGAAAAATAAGAGAAGAAAGGAAGAGGGAGGGATAGGGNGAAAGGAAAGAAAAAGAAGACACAGAAAGAGAAG
AGAAAAGGAGAAGAGAGGAGGAAATAAGACAAGAAGGAAAGAGAGATGAAAAAAGAGAGAAGGGTGAGGGAGGAGGGAGGAGAAAAAGAAAAAATATAAA
AAAAATAAAAAAAAAAAAATCGGGAAGAAGAGAGGAAGGGAAGGAAAGAGAGGAAGGAGAAAAGGAGAGAAGAGAGAGGAGAAAAAAAGGGAGAGTTGAG
AGAAGAGAAAGAAAAAAAATGAAGAGTGAGAAGGGAGGGGGGAGGGAGAAAGAGGATGAGAGAGAAGAGGAGAGATGTGGATATATAAGGAGGGAGAGAG
AGGGAGGGAAGGGAGGGGGGAGGGAGAAAAGGAGGAAGAGGAAGGAGGGGGAGAGGAGGGGGGAGAAGAGAGAAGGAGAGGAGAGGAGGGAGGAGGGAGA
GGGAGAAAAGAGGGAAGGGGGGGGAGGGGAGGAGAGGGGGAGGGGGGGAGGGGGAGGGGAGAGGGGAGGGGGAGGGGGAAGGGGAGGGGTGAGGGGGGAG
TGAGAGGTGGAGAGGGGAGAGAGGGGAGTGGGGAGGCAAAGAAGAGGGAAGGGGGGGGAGGGGGGGGGAGGGGGGGAAAA
AAAAAAAAGAACCCCCCCCC
CCCCCCTCTTTTATTTATAAAAAAATAAAAAAAAGAGGGGGGGGGGGGGGGGGAGAAAAAAGAAAAAGAAAAGAAAGAGGTAGAGAAAAGAGAGAAAAGA
AAAGTAAAAAAAGAATAATAGGAGAAAAAAAAAAAAAGGAA
>LE_HBa0197O10_T7_110891 (trimmed for quality and cloning vector)
AAAAAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.247075
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0197O10
Clone
Clone name
hba-197o10
LE_HBa0197O10
P197O10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found