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Clone Read LE_HBa0197B09_T7_110265

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0197B09_T7_110265
Primer
T7
ID from Seq. Facility
LE_HBa_197_B09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
51 trimmed for vector and quality, 850 raw
Sequence
>LE_HBa0197B09_T7_110265 (raw untrimmed)
GGGGCGCGGGCCCGGGGGGGTACCTCTAGAGTCGACCTCGCAGGCTCGCAAGCTTACGGACGAAGTACATGCATACTTCCCATAATGGGTGAGAGAGGTA
GAAGGAAAAGCGAGGGGCAGGCCCTTATGGGGGTNGAGCACCAGCAGGACACNAGGCANAAGGAGCAGAAGGAAAGAAGAACGGGCGANGANGACCTCCA
GATTATGGGGAAAGGATAAGTTTGAGTTTAAGAGGTTGATTATTGATTTTGTTAATGATTTTTAAGTCCTCGGCAGTGTTTTCTATTTATTATGTTTGA
A
ATGATTGGGGTTTAGATTGGTTGGTTCGCTACATAGGAGGATAAATGTGGGTGTACTCACGGCTCTTTTGGGTCGTGACAATTTCCCACGATATCACTAA
TACCTTCCCCTCATCACCCATCACATGCTACTCTTTATTCCACCCCTTTTTGTGGTGTAAATATACTTTTTTTTTCCCCCCCCCCTAACAATTTTTTCAT
AAAAAAGAAGGTGAGACTTAATTAAAATTTTTTAATTTAATGANAGTAGCCAATACACGCTCCCTCGTCGTACTATTATTTCTTTATATCTTTTGCTCTT
ATTGTCTAATCTTTTTCTTGCGAATTCTTATTCTTATATTTTATTAATATTCTATATTACTACATTCGCATCACCTCTTATGATTTCCAGCCTCTATCAT
CCTATAGCACGCGTCAATGCTGTGAATTTATTCTTCGACCTATTACTTACATTCGTTGCTGCTATCTCCTCCCCGTTGACTCCTTCGTGTGAAGATTTCC
TCTATCATACGCTACTGCTCATAAGATTAACTCGTTCCGTGCTTACTTTG
>LE_HBa0197B09_T7_110265 (trimmed for quality and cloning vector)
AATGATTGGGGTTTAGATTGGTTGGTTCGCTACATAGGAGGATAAATGTGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.830769
Expected error %
2.788
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0197B09
Clone
Clone name
hba-197b9
LE_HBa0197B09
P197B09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found