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Clone Read LE_HBa0194B16_SP6_109510

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0194B16_SP6_109510
Primer
SP6
ID from Seq. Facility
LE_HBa_194_B16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
292 trimmed for vector and quality, 870 raw
Genbank Accession
DU094567
Sequence
>LE_HBa0194B16_SP6_109510 (raw untrimmed)
CGCGAATTTCGTACGTTTTTGGCTATTCTTAACTTTTATCCCTTTCTTTCTTCTTTTAACTCTTCTCCAAGTCCCCTTTTCAACTAATTTAGTTTTATTT
ACCCTATTAATTTTCTCTTAACAAATCACGAAATTATTTTGAGCAAATAAGATTGTTTATTCTTTGTTCTTTTAATTATTCATAAATGTTTTTATGTGTT
TATAGAAAAAGAAAATTAGATTGTTTAGTCTTTGTTCTTGTTATAGGCACACTCGGTAGCCCTTCCTCCATAAAAATGTACATGTTTTTTCAAAGGAGGG
GGGAGGGTAGTTGATAATCTTATGTTAATATTTTACTACATCCAACTTGATAACATGTTCTTTAAAAGTCTAAGTTCTTGAAATAGCATTCAGATATATC
ACTTTCACTTTTTGAGTTCTCTACATGAGCGTTAACGTTGACATTGTACTTTGTGTTCCTATTTTTTTTTTTTTTTCCTCCCCCCCTACATCTCATCTGC
ATATTATGAAAAAAAATAGAGTCTGTCAATTATATTTATTATATTTTCCTAAAGAGGTATTATGCATTTTATGATTTCGGTATATAGTAATGGTTATACT
CAACTGAGAGTGATTTATTATAATATTCTACCCCTGAACCTAATTTGCTCTACTCTTATGTAGATGACTCAAACAAAATTACATCGCTTCTTAGAGAGTC
TAAATGGAATCTATTAGCATTTATTGAAAATGTAAAATCATATTTTTGGTCCTTTGATTTAGCCTTATATCAATCGTCGTATATCGAATTGTTATTTTGA
TCTTTATGTTTTCGTTTTTTTGTTTTATCTGTATTTTCTGTTCAACCCTTCGTATTCACTCTGCGATTTA
>LE_HBa0194B16_SP6_109510 (trimmed for quality and cloning vector)
ATTCTTAACTTTTATCCCTTTCTTTCTTCTTTTAACTCTTCTCCAAGTCCCCTTTTCAACTAATTTAGTTTTATTTACCCTATTAATTTTCTCTTAACAA
ATCACGAAATTATTTTGAGCAAATAAGATTGTTTATTCTTTGTTCTTTTAATTATTCATAAATGTTTTTATGTGTTTATAGAAAAAGAAAATTAGATTGT
TTAGTCTTTGTTCTTGTTATAGGCACACTCGGTAGCCCTTCCTCCATAAAAATGTACATGTTTTTTCAAAGGAGGGGGGAGGGTAGTTGATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.894654
Expected error %
0.600559
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0194B16
Clone
Clone name
hba-194b16
LE_HBa0194B16
C08HBa0194B16
P194B16
Clone type
BAC
Contamination
none
Estimated length
108,907
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found