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Clone Read LE_HBa0193O08_SP6_109353

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0193O08_SP6_109353
Primer
SP6
ID from Seq. Facility
LE_HBa_193_O08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
493 trimmed for vector and quality, 1001 raw
Genbank Accession
DU094467
Sequence
>LE_HBa0193O08_SP6_109353 (raw untrimmed)
CCCCGGTATTTCGATCAGAGTAGTGTGGATAGTATGGGGCGACCAAGGCTGAACATCCAGGGACACTACGATTCAGATTTAAGGTTAGGTCCATATATAT
ATATACTTCCATATTAACTACTGTCTACATATACTAGTTCCCTTATTGACAAGTAAAGGAGCAAAAGAATTCACCATTTGGCCCGTCCCCTGTATAGTGC
GGGACAAACAGAGAATAAAACCTTATCAGTAGATACAACTTTTCTCTCGATAAATCAAAAAGAAAATTCATAAATGTGCAAGAAGATGATGCAAGGGTTA
GTAGGTACAAATGCTCAGTTGTAGAGCTCCCAAAAAACTATCCACCCCTTTAGATATCCTCCTTTTCTTTCCTTATTTAGCTTAACTTCCATGTTGCAAA
GGCATATATAGCCCCAACTGATTTGCCATCTCCGTGGACGCAATGTTATCCAAACTCCCAGCATCAATGATTATCTTTGCACCGGCCCAATTCTGACATA
GATTTTGAATACAGCCTTCCGTCTTCTCCCTCCTTTCTGGTGACGTTGGCTCATGTTGATACACAATCCTAATGACGGTGAGACCTATCCCCTTTTCCTG
AGCTTGAAAACCCCCAGCTCAAAGGAAATACCCATGATAATTTGAACCCAACAAGAACCCCAGCCCGGCTTCCCTTGGCAATAAGGAAAAAACAAAAAAA
TTAGGGACCCCCCCTTCTTCTTACCGCAATCAACAAGAAATTAGGGTTATAACCAAACCTTTCCCTTCTTAATTATTTGGTCCCTAGCTATTATATGAAA
GGAAAACCATTTGTCGGGTTCTGACTAACAAATAATTTTCGGAACCCCCATCCCAACATCCCTCTTAAAGGAAAAACACTTTAAACCGCGGGTCAAACAG
ACCTTTGTGGCCGAAATTGCTAAACTCACCAGCACAAAAGTCAAAAATATGAAAAAAACAACTAACTAATCAAATAAAAAACCATACAAATTAGACACGA
T
>LE_HBa0193O08_SP6_109353 (trimmed for quality and cloning vector)
GCGACCAAGGCTGAACATCCAGGGACACTACGATTCAGATTTAAGGTTAGGTCCATATATATATATACTTCCATATTAACTACTGTCTACATATACTAGT
TCCCTTATTGACAAGTAAAGGAGCAAAAGAATTCACCATTTGGCCCGTCCCCTGTATAGTGCGGGACAAACAGAGAATAAAACCTTATCAGTAGATACAA
CTTTTCTCTCGATAAATCAAAAAGAAAATTCATAAATGTGCAAGAAGATGATGCAAGGGTTAGTAGGTACAAATGCTCAGTTGTAGAGCTCCCAAAAAAC
TATCCACCCCTTTAGATATCCTCCTTTTCTTTCCTTATTTAGCTTAACTTCCATGTTGCAAAGGCATATATAGCCCCAACTGATTTGCCATCTCCGTGGA
CGCAATGTTATCCAAACTCCCAGCATCAATGATTATCTTTGCACCGGCCCAATTCTGACATAGATTTTGAATACAGCCTTCCGTCTTCTCCCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96815
Expected error %
0.166259
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0193O08
Clone
Clone name
hba-193o8
LE_HBa0193O08
P193O08
Clone type
BAC
Contamination
none
Estimated length
75,332
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found