Clone Read LE_HBa0193M08_T7_109258

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0193M08_T7_109258
Primer
T7
ID from Seq. Facility
LE_HBa_193_M08-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 937 raw
Sequence
>LE_HBa0193M08_T7_109258 (raw untrimmed)
GAGTGCAATGAAAGTCAGAGGGGAAGGACGTGTTTCTCTCTCTTCGTTTGAGTGTTGGGGTGTGCGAGTATGGAGATACCCTAGATGCTTGCTAGCCATA
TCGTCGCGACGATCGGTGCGTGTCGACTGTTGTGAGATGGTTCAGAAAGGGGTGGGGAGGACGAGGATTCTATGCCGTGTTCGGGTTCGATATCTGTATC
GTAATAANCTCCTACGTGCGGACAACTACGTGGAAATACCATTCTCGAGAGAACAGCATAACTCCCCGACATCCGTACCTTGAGACTAATTTTGGACTCT
CCGCTGTAATTCGGCTATCCCAGTCATGGGCGTACGTGCTGAACTGCGCTGACGTTGCGGAAGACGAATGTTTGGGAGTTAGTGCGTCTCTTGTGTCTGT
CTGTTGCCTGTGTCTTCATATAAATTGTATGCGGCATCGAGCTAACGTGTGTCCTGGTTGTCTGTTGTGTCGACGAGCTGCTCAAGAGAAGTTCACTCCT
CTGTTTAGCAGGCTGAGGCTATTGGGAGCAGATGGTGAGGCGGTGGAGGTGAANTGACGGTTCGATCGTGTAACGTGGCCCTAGCTGTACGCTCGATGGA
CACGAACGCGCGACTGGTCTGTCCGCGTCCAGCAGAAATGAAATGCATGGCACAGAATGTATGCGATATAGCTGGACGGCAGCACGAAGAGAAAACGAAG
GATAGTTGTGATGCCAGCGGGGCTACGGAGACAGGTGGCGCGAGACAACGACGGAGCCTCACGCAGGTCACGTTGCGAGTAACGCTGGACCAGTGCGTCG
CGCACCAGATGCTTACGCANAATGCCATGTACTCAGACTCGACATTGGTAAACTATACACCCGACTATTGTGATCACCGCACTCTCATCTGCATCAACCT
TATCATCGTCGCAAGAGTCACGCGATAGTGTATATGC
>LE_HBa0193M08_T7_109258 (trimmed for quality and cloning vector)
TC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
5.31548
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0193M08
Clone
Clone name
hba-193m8
LE_HBa0193M08
P193M08
Clone type
BAC
Contamination
none
Estimated length
90,844
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found