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Clone Read LE_HBa0193M06_SP6_109253

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0193M06_SP6_109253
Primer
SP6
ID from Seq. Facility
LE_HBa_193_M06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1182 raw
Sequence
>LE_HBa0193M06_SP6_109253 (raw untrimmed)
CTTGTGTGGGCTGATACGAGATCATCTTTCTCCTTTCATTAGAGGGAGAGGCGCTGAATATGNCGTAGTAAGTGATAATACGTAAATATTCAGATTAATT
ACGATTTTCTCGTCTGCTCANGACCTTNGNGATCTTCTCTCCCTGGNTCTCTTCAGCTGCGCGTCTATTCTTACATAAGAATTGAAATTATTAACTATGT
TACTCTATACTTTTACTGATTCAGTTTCTAGATCAGTAAATCATTCATCATTGTGAATAAACTTACATGACTCATCCCTGCGCCTATCTCTCTCGATGTG
TGAAGTTTGTGTATGATGTTGTGACTAGCACATGACGATCCTCCACATTTCGACTACCTAATGAGCATGTCAGGAGATGAAGCTATGTAGGCGCTTCTGG
AGCTATTGTCCATGGATTGTACGCGTGTCCTAAGGTCCGATTCTGGAACGATTGTTGACCGTCACTTGTCGGCTGCTCGGGTAAGGTCTATCTCGTCTTA
GCTGGATTCGCGTGAGGCATGGACNGCTCACATCAGATAACGTCGCATAACACTTCACGTCTCGTACNAGATGACAAGGTCGCAGCGTACTACATCTNCA
CGCTTCACATAGCAACACATCTGAGGAAGGCGAGACATTACATCGTTAACGCTCACTCGCATCCTGTNCCTCAAGCATGCGATAGACACACATCTCATCG
TAACAATGTTGANCGAACTAGACCGTTNCTTCTACACGATTGTNCACTACAGGTGAGAAGATGATCACTCAGTCGAATCCGTCCAACACGCATCNAACCA
TAGACGCCTAGACATCCTACCGACACACAGCTACATATCAGATACTGTACAAGACACATATTTGAGATCAATANCAGCTACTTCNTATACCCACGTCGGT
ACGACTCATGTGCTCTCATGCCNGACGCTCTCTTGAGACCTATGTGATATGAGAACGCGTTACGTGTGGTAATGTGAGCAATCCTCGCGGCTAGCCGCGT
CACTCTAATGCGCGTGCTTCTATACATNATCCTACCTGCGCGTTCTATCTATTGATATATTAGCTGTCATGTCATNCTCGTCATCCACTNGCTGGTGCGT
ATCTGGCGCACCGCACGTATCTCACTATNCGCAACATCAATATAGCGCTCTCTCTCCATCGGGCTGTACATGCGTCACTCTN
>LE_HBa0193M06_SP6_109253 (trimmed for quality and cloning vector)
TGTGT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.3683
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0193M06
Clone
Clone name
hba-193m6
LE_HBa0193M06
C08HBa0193M06
P193M06
Clone type
BAC
Contamination
none
Estimated length
98,667
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found