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Clone Read LE_HBa0193E20_T7_108900

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0193E20_T7_108900
Primer
T7
ID from Seq. Facility
LE_HBa_193_E20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 822 raw
Sequence
>LE_HBa0193E20_T7_108900 (raw untrimmed)
CAATGTACATTTCCGTTTAAGAGGGTGTCCTCCTCTCCCCCGACGGCAGTCATCACATGGATCAATCTTTTTCTATTCAGTCATTAGACCTAATCGTGGC
TTACGACGGAGCCCAATCATCCCACAGCACTACAGAGTCAAAGCGAGAACATAGAGCGACTTCAGGTTATACCAAGCATTTGAAGATTGTGCGAGAAGTC
ATGTATAGAGGTTCTGTCCTAAAATATCCCTACAGGCTATCAGAGATATTAAAGGAATCGGGGGGGATGCCTACGCTTCCGTACGCACGAACCTGGCGAC
GGTACGCACTAGAGGCGAGGAGGACATAGCATATTTACATTCGCCTCATGAACATACCCTGTCTAACGTTAAGCTTTATAAGACA
ATAAAAGCGTCTCGT
AATTTGAGAATTCTTTGACGACCGTCAGATATAGATAGAGCACCTCACAAGAAAAGAAGGGGAAAGATCTGCTCTGTGAAGCCTCAGACAGGACGCACCA
TACGCTAAAGCAGAGTCGTACTACGATGACTTGTTATTTAATCATACTTGCCGTTCCCCCTCTAAATCAAGAAGCAAAAAACACATAAGAGATTGCTCGA
TACTATAAGATAAATTAGATAGATAAAACAAAACGTCAACTATTAGCCAGAAGTCATGCAGATTATGTCAACTTCTCTGTCATGTGAGTGAGGTGGACGT
CTATGCGAGCGTTCATGGCTCTTGCATGGTACGTTGTGACCATAGATGTGCAGGTATCTGTAGTGGAGGGCGATTTACTCTGTAGTATTCTTCCTGTGTT
AGCTGTGTCGTGATGATATGAC
>LE_HBa0193E20_T7_108900 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.18959
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0193E20
Clone
Clone name
hba-193e20
LE_HBa0193E20
P193E20
Clone type
BAC
Contamination
none
Estimated length
101,799
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found