Clone Read LE_HBa0193C03_SP6_108769

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0193C03_SP6_108769
Primer
SP6
ID from Seq. Facility
LE_HBa_193_C03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
520 trimmed for vector and quality, 976 raw
Genbank Accession
Sequence
>LE_HBa0193C03_SP6_108769 (raw untrimmed)
CCCGGGCTTGGTCTTCAAGCGATATAGATATTCTAAAATATTATCTTCTTCTATTTATAAGAGATAATTCTGTGTATACTTACGATAAAAATTATCTTAT
TAAATTGTTAGACTAAAATATAATAAAATAAAGATTTGTTGTTTACCTAGCCTCATATTACATGTGACTATTATCAATATGCATTTGACTACTTGAGCCT
TCATCAAATGATCGATGATCATGCATCAACAATTGTTGAAATGATGGTTGAACAATTGGTTCTACAAAATGAGGTTGATTGATCGTGGTAAGGCCATAAT
TTTGAGCCAACAAATTCATGTGATAACCATGATGACCACTAACTTGAAATGCAACATTTTGGCCTGTCGATACAGTCTTTACATACATCTCCAAAACATT
TATATCAATCTTATCCGCAAATTTTTGAGGTATGAAAAGAAATTGTAACAAAGATTGGTCATTCTCAATTTTAAACTCAATGAACCTTGTATTGTTACCT
TGAATTGAACATGGATATTTCTGGGAAATATCCATATGAATATTTTCACAATATGTTCCCATTTTCCCCTGTAACAATCCAACAATTCAACATAGGTAGT
TGAAGTCGACATGCCAATAATCTTCTACCACATTCAGTAATACCAAAATCCGTTCATATCCGTAGTTATTTTTCCACCCCATACAAAGCAACCATCACAC
TATGTTCAAAAGCCGTCCTCCTAAATCCTCCCATAAAGATAAACTATTTTTTAAACAATATTATTAAATTAAAAGAAAATTTTAAAACCTATAAAAAAAA
CATAACAAGGAAAAACTCCCTTATTTAATTCTACCCGAATAAATTTTCGAAAATAATTTTAAAATGGACCCAACGGGAAAAATTTTGGGGATTTTATTTG
AACTGGAAAAAAATCAACAACATTTTTTTTAGCCCCTTTGCCCGTTTGAGAAAGGGGGAAAAGATCTTAAAAAATC
>LE_HBa0193C03_SP6_108769 (trimmed for quality and cloning vector)
ATATTCTAAAATATTATCTTCTTCTATTTATAAGAGATAATTCTGTGTATACTTACGATAAAAATTATCTTATTAAATTGTTAGACTAAAATATAATAAA
ATAAAGATTTGTTGTTTACCTAGCCTCATATTACATGTGACTATTATCAATATGCATTTGACTACTTGAGCCTTCATCAAATGATCGATGATCATGCATC
AACAATTGTTGAAATGATGGTTGAACAATTGGTTCTACAAAATGAGGTTGATTGATCGTGGTAAGGCCATAATTTTGAGCCAACAAATTCATGTGATAAC
CATGATGACCACTAACTTGAAATGCAACATTTTGGCCTGTCGATACAGTCTTTACATACATCTCCAAAACATTTATATCAATCTTATCCGCAAATTTTTG
AGGTATGAAAAGAAATTGTAACAAAGATTGGTCATTCTCAATTTTAAACTCAATGAACCTTGTATTGTTACCTTGAATTGAACATGGATATTTCTGGGAA
ATATCCATATGAATATTTTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.922221
Expected error %
0.432829
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0193C03
Clone
Clone name
hba-193c3
LE_HBa0193C03
C12HBa0193C03
P193C03
Clone type
BAC
Contamination
none
Estimated length
66,717
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found