Clone Read LE_HBa0192K10_SP6_108402

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192K10_SP6_108402
Primer
SP6
ID from Seq. Facility
LE_HBa_192_K10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 459 raw
Sequence
>LE_HBa0192K10_SP6_108402 (raw untrimmed)
AGAATACCGCGGACAAAAAGACGAGGGGATGTGAATTGATCGGCCTTTGAGTGGCCGCGATAGAGGCCAGCTTCTCAAAGGAAACATCAAAACCAGAGGG
GCAATCAAGAGTAATTTCCTCGCCCTAAATTTAGGAAGGCGCCTAAGAGCCGTCGGACACCACACAGAGAATTGTTCACCTCCGAAACACAATATACAAA
ACATGATCAATAACAACTATGATCAATATTGAGGAAACCGTCCTGAATGGATGACATATTGGATACTCGAGGGTGACTACAAGTCATTTTTTAATTGAGT
CTTATGACGATATTTCGTTGATAAGAAGAATCGCCAACATTGGCCATGTTTTTCATATGAAGGTTGTAAGCTTTCTATTGAACATGCTACGCCTTTTCTA
AAGGAACAACCTCGGACCTAATCACACCAAAACGGAACATTCGGTTGTCCTTGCTCTTG
>LE_HBa0192K10_SP6_108402 (trimmed for quality and cloning vector)
AAACACAATATAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.516307
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192K10
Clone
Clone name
hba-192k10
LE_HBa0192K10
P192K10
Clone type
BAC
Contamination
none
Estimated length
61,308
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found