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Clone Read LE_HBa0192D17_SP6_108080

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192D17_SP6_108080
Primer
SP6
ID from Seq. Facility
LE_HBa_192_D17-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
438 trimmed for vector and quality, 1015 raw
Sequence
>LE_HBa0192D17_SP6_108080 (raw untrimmed)
GCCGCGGTATCTCCTCATTTGTATATTTTTTTCGTAATGATCGTCTGCTGAAAGATCAAAAAGAAAAAACTAGAACACGTTATTTTTATTTGAACTGCTT
ATAGATATGAAATTTAGAGAAAATTCTCACCCAATTTATACAGTTTCCAAATAGTTATATAGTTGCCGAACTTAGCCAAAAGAAACAGCAGAACCGCCAT
CTGCCAGAGGTAAGATCTTGTCAAATTCCCGCAAGTTCACAAGATTAGGTAAATAATTGAAGTAACATGGGAAAACAATAAAACTTACCGGCACTTGATA
TTTATATTGACCAATAGACACATGATATATATTTAGGCACATAGACTTCTATCCTATGTTTACTCGAATTTTCAAAATATGTTCTTACACCCGTATTGGA
TCGTCCATAAATGCACTAGTTTTGGAGTATGTATCATGGACTAAGTGCATTTTGAAGAGTCAAGGCAACAATGCTTCTATTACTTAACCATGATTAATTT
ATGTTTTTTTCTGAATGGTTTGACAGCTACCAAATCCTAAGATTCGAATTCCTAGGGTCAGTTGAGTTACTCGGCACCAAAGTGGGTGGAAGGTGGCAGG
GACCTCTTGAAACTAGTTGACGTCACCACAAGTTTGCTTTTTCTATATTATGTTAATATGGTTTGGGTGGAAATTTTATTGGTGGAAAATGATAAAATTA
TGTGACAATGGAAATCATGGGAATTGTAAGCACTCTCCTGTTCTTGCTGTCAATCCAGGGGACCTCCAGACAAGAGGGCTTGGGTTTTTCGAACTACCAT
TCTTATTAAGGGAGTATCATCTTTACTTATTGCTTTTCTAAATCTTTTTCTATTAATATGGTGTGAGATGTGTTTTTTGTGCGCTTACTCTTCATACGGC
ACGTGTAAGTGAGTTAACAAATTACAGAGTTGAAAAAAGATGTAGGGGAAGCTCCTAACAGAGCCCCTGCGCGACGAGGCCTGGAGGCGAGGTGCGGTCT
TCGGGTCGGGTAGGT
>LE_HBa0192D17_SP6_108080 (trimmed for quality and cloning vector)
TCGTAATGATCGTCTGCTGAAAGATCAAAAAGAAAAAACTAGAACACGTTATTTTTATTTGAACTGCTTATAGATATGAAATTTAGAGAAAATTCTCACC
CAATTTATACAGTTTCCAAATAGTTATATAGTTGCCGAACTTAGCCAAAAGAAACAGCAGAACCGCCATCTGCCAGAGGTAAGATCTTGTCAAATTCCCG
CAAGTTCACAAGATTAGGTAAATAATTGAAGTAACATGGGAAAACAATAAAACTTACCGGCACTTGATATTTATATTGACCAATAGACACATGATATATA
TTTAGGCACATAGACTTCTATCCTATGTTTACTCGAATTTTCAAAATATGTTCTTACACCCGTATTGGATCGTCCATAAATGCACTAGTTTTGGAGTATG
TATCATGGACTAAGTGCATTTTGAAGAGTCAAGGCAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.946052
Expected error %
0.270398
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192D17
Clone
Clone name
hba-192d17
LE_HBa0192D17
C12HBa0192D17
P192D17
Clone type
BAC
Contamination
none
Estimated length
50,055
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found