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Clone Read LE_HBa0192B09_SP6_107968

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0192B09_SP6_107968
Primer
SP6
ID from Seq. Facility
LE_HBa_192_B09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
546 trimmed for vector and quality, 1008 raw
Sequence
>LE_HBa0192B09_SP6_107968 (raw untrimmed)
AAAAAAAATTCGTTTTTTTTGACGACTTGTCTCAAANTCCTTTTCATTATGNAACTATTTNAAGGAAGACTATGCAGATGATGATCTTGATGATAGACCT
AGTCCTAAAGACAGTGATAATGTGAATCCTGAAGGTGAGATGAAAATGTTGATCAAGGTCAGTTTGCAAGAAGCAAAGTATGATACTCTGTTCCCTAACA
AGCTGATAGGTTGTCCAAATTCCTCTCCAACAATGACTTCAATAGAGGAAAAATTGAAAAAACCTTTTTTTGATATGTCAAGGAAAAATTACTAATTATT
CAAGTACATGTTGATGATGTCATTTTTGAGGAAATCTTTGGGTGGTGTGTGAAGAGTTTGTCGCACACATGAATAATGTGTTTTGAAGCGAGCATAATTG
AAGAATTAAATGTCTTCGTGGAGCTATAGATCAAGAAAAACTCAAAAGGTACCCTCGGATGTCATTTATGAGCTGCTCAAATGGTAACATACTTGAACTA
AAGACAATGTTAGGAAGGGGTGATGACATCATGGAGTTTTGCCAAGTGGAATATCAAGTTATTGACATCTTCGCTAAAGCCCTGATCAGGGACCGGTTGT
ATACTCTCATATGAACTTAAATACAGGGAAGAATATATCACAGTGTTCAAGGCGATTGATGTGTGATCAAGATAGGGACCTGGTACCCGTATATTGAAGT
GGCTGTAAATGTCTCATGTTACGAATGCCTAGATAATTCATACTCCCAATGGCACTAACCTTGAACTGGATACGGATAAATATGGCTTCAGGTCTTTGTT
CTTGTACAAAAGAAAACCTTGTGAGGGTTCTGACCAAATTTGAGAATTTAATAAAACTGATGATTGGTCCAATTAACCACCAGGAAATTCTTATTAGAAG
GAATGCGAGTTGTATTATCGGTGCCTAATGACAGCAGTTCTCTATAGAATTCATATTACCAACACTCCATCACTAACACTCCTCTCCATCCTTTTTTAAA
TGTTTGAG
>LE_HBa0192B09_SP6_107968 (trimmed for quality and cloning vector)
AAGGAAGACTATGCAGATGATGATCTTGATGATAGACCTAGTCCTAAAGACAGTGATAATGTGAATCCTGAAGGTGAGATGAAAATGTTGATCAAGGTCA
GTTTGCAAGAAGCAAAGTATGATACTCTGTTCCCTAACAAGCTGATAGGTTGTCCAAATTCCTCTCCAACAATGACTTCAATAGAGGAAAAATTGAAAAA
ACCTTTTTTTGATATGTCAAGGAAAAATTACTAATTATTCAAGTACATGTTGATGATGTCATTTTTGAGGAAATCTTTGGGTGGTGTGTGAAGAGTTTGT
CGCACACATGAATAATGTGTTTTGAAGCGAGCATAATTGAAGAATTAAATGTCTTCGTGGAGCTATAGATCAAGAAAAACTCAAAAGGTACCCTCGGATG
TCATTTATGAGCTGCTCAAATGGTAACATACTTGAACTAAAGACAATGTTAGGAAGGGGTGATGACATCATGGAGTTTTGCCAAGTGGAATATCAAGTTA
TTGACATCTTCGCTAAAGCCCTGATCAGGGACCGGTTGTATACTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951848
Expected error %
0.202616
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0192B09
Clone
Clone name
hba-192b9
LE_HBa0192B09
P192B09
Clone type
BAC
Contamination
none
Estimated length
124,570
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found