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Clone Read LE_HBa0190E11_T7_107349

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190E11_T7_107349
Primer
T7
ID from Seq. Facility
LE_HBa_190_E11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
548 trimmed for vector and quality, 834 raw
Sequence
>LE_HBa0190E11_T7_107349 (raw untrimmed)
GGGGGGATCCTCTTAGAGTCGACCTGCAGGCATGCAAGCTTGGTTATGCTAACTGCGATGATTCTATTTGATTTTCTTTCGATGATTCTACTAATAAGAT
GTCTTGGCTTTCACAATTTGCAGATGTGATGGACTTGCATGAGCAGTATGTCTGTTTTCTAGTAATCCTTTTTCCTGCCCTGGGAAGATTTCCGACTTAC
AGATTTCGTGTTTTATGTGAACAGTTTGAAGCCTTGGCTTTTGGGACCACTGCTATGTGTGGATAAGATACCTTCTGGTTCTGGGTTATATCAACTGTTC
CTTTCTACTGCATTACCTGACGACAGTATGTAACTCTTCAGTATATTTATTCGGTAGGCAATGGAACATATAATTCCAAGAATCCTCAAAGCAGAAATGG
ATTCTTGTTTTATCTAACGAAGAGTCCAGAGAAGTCTTTGCTTTAAACTAACATCGGGAGACAAGGTTAGGCACTGGCAACGCAGCATCTATTCCAGGCA
CTAAGCCAACAGGGGGTGCTAACCGATCACCCTACCCACAGCAGATGCCCAAGTGTTGGAGTTCCAGCTAATGTAGGGAATACTCTCTCATTCCCATACT
CCTCGTCTATGTATTGCATCTCCCTTATTGGCTTAGAAGGTACGTGTCACCGTGCTTTGATTAGGGTTGCCTCTCGCTTCTTATATCGCATTCCTCCTCC
TATTTCATCCCTTGCTCTTGCTGCCCTTTATTTCCTATCTCCTTCGTTCCTGTATCCTTCCCCTTTATTTCTATTTTCTTTACCTCTTTTTTTTATCTTT
GTTTTTTTTCTTTTCTATTTTTTCAATGTCGGTT
>LE_HBa0190E11_T7_107349 (trimmed for quality and cloning vector)
AGCTTGGTTATGCTAACTGCGATGATTCTATTTGATTTTCTTTCGATGATTCTACTAATAAGATGTCTTGGCTTTCACAATTTGCAGATGTGATGGACTT
GCATGAGCAGTATGTCTGTTTTCTAGTAATCCTTTTTCCTGCCCTGGGAAGATTTCCGACTTACAGATTTCGTGTTTTATGTGAACAGTTTGAAGCCTTG
GCTTTTGGGACCACTGCTATGTGTGGATAAGATACCTTCTGGTTCTGGGTTATATCAACTGTTCCTTTCTACTGCATTACCTGACGACAGTATGTAACTC
TTCAGTATATTTATTCGGTAGGCAATGGAACATATAATTCCAAGAATCCTCAAAGCAGAAATGGATTCTTGTTTTATCTAACGAAGAGTCCAGAGAAGTC
TTTGCTTTAAACTAACATCGGGAGACAAGGTTAGGCACTGGCAACGCAGCATCTATTCCAGGCACTAAGCCAACAGGGGGTGCTAACCGATCACCCTACC
CACAGCAGATGCCCAAGTGTTGGAGTTCCAGCTAATGTAGGGAATACT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.978701
Expected error %
0.59339
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g13560.1 Score 65 E Value 3e-11 Identity 21.30% Align. Length 140bp (25.55%) Frame 1
68414.m01590 aminoalcoholphosphotransferase (AAPT1) identical to aminoalcoholphosphotransferase GI:3661593 from [Arabidopsis thaliana]
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At1g13560.2 Score 65 E Value 3e-11 Identity 21.30% Align. Length 140bp (25.55%) Frame 1
68414.m01589 aminoalcoholphosphotransferase (AAPT1) identical to aminoalcoholphosphotransferase GI:3661593 from [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190E11
Clone
Clone name
hba-190e11
LE_HBa0190E11
P190E11
Clone type
BAC
Contamination
none
Estimated length
69,037
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found