Clone Read LE_HBa0190D17_T7_107313

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0190D17_T7_107313
Primer
T7
ID from Seq. Facility
LE_HBa_190_D17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1222 raw
Sequence
>LE_HBa0190D17_T7_107313 (raw untrimmed)
TTAAATGACTGTCTACGACGTAGCACCACTACGCACAACGGGTAGACAACTCATCGCCGTATGCTTCCCGGGGCAGGGAGTCGCATAGAAGTTTCTCAGA
TCACCCCTTCTACCTATATTCAGGGGTGCTTGGCAATAGATAGTGTTAATTTGCGGGGGCCCCCTCCGCAACGTTATGGAGGGAGGATCGGGTTGTGTTG
GGGATCCGAAAGGAGAGCACGTCGAGAGCATGGGATAGTTATGTATGTCAGAGGTAGGCGGTCGGCGGGTGTGAATAAGTCAGCTGATGCTGTTACAATT
GTGGTTTGACATAAGGCTGACGGAGTAAAACAGACCGTTGCCTTCAGCTGTCTGAAGAAGGAGCGGACACGGCCTCTCCTCACCGCGTTCGCGGGGACCC
ATGACACAACAACTCACTCATGAGAACAACTATTCCGAGGGATAGTATTGCATGTACAAAAGACTATAGAATGATATCGTGCAGACGAAGTCTTTGAGAA
AGTAGTGAGGAAGCAAATCTCCAGAGCAAATCGTATACACTACCCCTAAGCCGACAGAGCCCTTGACACACAGGCACGTGCGAGATAGGCATGAGTCGCA
TGCAGACGTTCAGCACGGGACTGGTGATGCGATCGACACAGGCAGTAGCAAGGAGAGACAACTGTCTAAGGGATGAGGACTGGGATACGACAGCCGAGGG
AAGATCAAGATGAGGGATATACATAGGGAACAGTAGGCAAATGCCTCAACGCGATCCGATATAATAAGGAGAAAAACATACGTAGCAATAAAGTTTCTAG
TTATGTATAAATGATGTTAACAGCGAAAATGCCGATGACGTAGCAGCGGCTAGGCCGTGGGGANGGAGCGGGTAGACGAGTAAGCACAGCACGACTAAGT
GCGGACCGCGATGGCATGGCTGAGTGGATGCGTACAGGTGGGACAACGAGGGGTGATCGGTCGGATGGTCGGCGAGCCGATCGAGCGACGGAACACCAGA
AGGTCTCGTCTTGANAGCAGGAGGGACAGCTACGCGGCTCTCCGAAGNGCGACGTAGGGCTATGACTGACACAGCCCGAGAGCACGGTGCGATGCCGGAT
CACTGCACGTCTTGTGCTATGTAGAGAACAAGTTGACATCAATAGATAATGGCCTGTCGTGAAAGTGAGTGTATCGAAGAATGTCGCGGGAGTAAGANGG
TGACGAGAGCGACTAGAAGACC
>LE_HBa0190D17_T7_107313 (trimmed for quality and cloning vector)
GCAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.97622
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0190D17
Clone
Clone name
hba-190d17
LE_HBa0190D17
C02HBa0190D17
P190D17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found