Clone Read LE_HBa0189P03_T7_107093

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189P03_T7_107093
Primer
T7
ID from Seq. Facility
LE_HBa_189_P03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 919 raw
Sequence
>LE_HBa0189P03_T7_107093 (raw untrimmed)
CATTATCCAAAACTTATACCTATTTGTTATGGGAGTATCCTCTGAGTCGACCTGTCGGCATGCCAGCTTTATTTTCTAGTTGCACATACCTACCTGTACT
TATAATCCACTTTATGTCTTTCTCAAGACATGCGAGATACTTCGAGTTTTTCCAGACGAGAGAACAAGCACCTGGAAATATCCTAT
GCACTTGTAAGCAT
ACGAGCTCTAGTTGATTTCTACTATTTCTTGTGACATTTCTTGTACCCTTCCCTTATATAAATTGCACAATTTTTCCTATAAGTTATTTAAACTATCACA
AATACCAACTATCGAAGTCTCACATTTCGCATCTCCCCACTCCGATTATTATCTCAACACTATGGTTCTACTCCAGATTCGTTAAACCCCTATTCCCATG
GGTACTACGATTCGCTCTGCTCCAACCAATAAAATTCATAGTCTTTTTAGGCGACTCACATATGGTTTAGATTATGATTCTATATTTCTTAACTTACAGC
TTCTATTCTACTTTCCACTTTCACCTTGTTTCATCAGCCTCACTAGCATTAGAACGTGAGTCATCGACTTACCCCCACGCCCCTTCTCCTCTCACTGTCA
CTACCCCATGCTCCGCTTCTAAACAATGAAATTTGGGTAACTATTCCTGTAATTATACTGTTCTATTATTTTATTTTCTCTTTTAGTCGCTCCGCTGCCC
ATCTATTTCAGTTGCAACAAACATATTAATAACTTCCTCACTAATGGCATATCCTCTGTGTGGAACATTCAAGTTGATCTGAACGACCTTAACATCTCAA
GATAGTGCGTGCTATAACTGCATGTTCCATCCTTCATAGTATAATACAATCTACTGCACGTACTAATGCAAGAATACTGCACCAGATGTTAGGTAGTAAA
TTTTGCTTCAGCTCTAATA
>LE_HBa0189P03_T7_107093 (trimmed for quality and cloning vector)
GCACTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.85813
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189P03
Clone
Clone name
hba-189p3
LE_HBa0189P03
P189P03
Clone type
BAC
Contamination
none
Estimated length
136,676
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found