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Clone Read LE_HBa0189K10_SP6_106866

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189K10_SP6_106866
Primer
SP6
ID from Seq. Facility
LE_HBa_189_K10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
589 trimmed for vector and quality, 1000 raw
Genbank Accession
DU092528
Sequence
>LE_HBa0189K10_SP6_106866 (raw untrimmed)
TTTCCGGATTAATCTTATGANNNNCNACACCCCCCGCCGGGATCGGCAACAACGANATCACACANGGTGGGCAAAGAGCCTTTAAAAGAGTTTATGAGGA
TCAATCTACCCCCTAGGGATCTTTATTGAGCCTTCCATCTAGCAAGTTCCTTTTCAGTTCCTCCAGAATACCATTCCATATCTCCATTGTTTTGTGTTCG
CTACCCAGGGGCATGCCAGGTCGATGGTACGCAAATGCTCCACTCTGCATCCCAGTATACTTGCAAGTTGCTGGATCTGAGGACCTCATTAACAGGAAAG
CGACCACTTCTTCCAAAGTTTACTTTCAACCCTGAAACTGCTTCAAACAAAACCAAAATCACTCTTGATGTAGCTAATCTGTTATGCTGTAGGTTCAGAA
AGAATGGTAGTGTCATCCGCATAGAGCATATGACACTTTTTTTCTTCCCCCACTCTATCTCTGATCTGAAAATCTCTAATCCATCTGTTTTGTGTTGTAA
TCCTCATCATACTATCGAAGCCTTCCATTGCCAAAATGATTAAGAAAGGGGAGAGAGGATCACCCTGTTTCAACCTTTTTTCTGATTCTAAAAGCCCACA
GATTGCCCATTCACAAGGACAGAAAACTTGACTGTTTTTATACATATCTCAATCCACTTCATCCATTTGCTACCCAAATCCATTTGTTTGAGAGTACTTA
GAGGGAAAGACCAATTCCACATGGTCACAGGCTTACTGAGTATCCAATTTGAACATTAGACCAAGGGCTCCACCTCTTTATCGTGAATCCGTGCATTCTG
TAGCCCTGAGTGATGTATCTGTAAAATTGCCTCCCCATTGTAATATGCTTTGTATGTTGTTTATTATTTTACACCCCACCTTTATTACAACCACACCACT
TCCTCCCCTATACACTGCCGTAAATATTTTATAATAGATCAATATGTCGTAGCCCGTGCTAAGATTAGTAATGTCCTAATAGGAGGACACGCCAAAGGTG
>LE_HBa0189K10_SP6_106866 (trimmed for quality and cloning vector)
GGGCAAAGAGCCTTTAAAAGAGTTTATGAGGATCAATCTACCCCCTAGGGATCTTTATTGAGCCTTCCATCTAGCAAGTTCCTTTTCAGTTCCTCCAGAA
TACCATTCCATATCTCCATTGTTTTGTGTTCGCTACCCAGGGGCATGCCAGGTCGATGGTACGCAAATGCTCCACTCTGCATCCCAGTATACTTGCAAGT
TGCTGGATCTGAGGACCTCATTAACAGGAAAGCGACCACTTCTTCCAAAGTTTACTTTCAACCCTGAAACTGCTTCAAACAAAACCAAAATCACTCTTGA
TGTAGCTAATCTGTTATGCTGTAGGTTCAGAAAGAATGGTAGTGTCATCCGCATAGAGCATATGACACTTTTTTTCTTCCCCCACTCTATCTCTGATCTG
AAAATCTCTAATCCATCTGTTTTGTGTTGTAATCCTCATCATACTATCGAAGCCTTCCATTGCCAAAATGATTAAGAAAGGGGAGAGAGGATCACCCTGT
TTCAACCTTTTTTCTGATTCTAAAAGCCCACAGATTGCCCATTCACAAGGACAGAAAACTTGACTGTTTTTATACATATCTCAATCCAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963975
Expected error %
0.416306
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189K10
Clone
Clone name
hba-189k10
LE_HBa0189K10
P189K10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found