Clone Read LE_HBa0189E21_SP6_106600

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0189E21_SP6_106600
Primer
SP6
ID from Seq. Facility
LE_HBa_189_E21-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
326 trimmed for vector and quality, 948 raw
Genbank Accession
DU092352
Sequence
>LE_HBa0189E21_SP6_106600 (raw untrimmed)
AAAAAAAACCCCGGCCAAACCCGCTACTGTTCCCTCTTCTTTACCCTTGTCGTTCGATTCTCCCTCTCTCTCTTTGTTCTTTCTAGTCTTTTTGAGCCAA
CTCCCTTTCTTTTACCCTAATTAGCATATTTTTAAGTATAATTTTATGGGAAGAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAGCCCCCAAGTA
ATTTTTTTAGAAATATTAAACCACTAACTTTATAATTATAAGCGGGAAGAGACAAAAACGTCCCTTAAACATTAAAGAAATCCGACTCCGCTTGGGATTA
CTTCATCGTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACCGAGTTCAGAGACTGAAATTCTCTGAAGAGTCTGTGACGGTCTG
TCACGCCTGTGAAGGACCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTGGGGGGGAGGGGAATCAGTACCTATTTTTTCACACCCCCC
CACGCGATTTGAAACGAGACCCCAAAAAAAAAAGGGGTACTCTTGACCGAGCCTTATAGGGTTCTGCGATCAACTGCCGTTTTTCCAGAAACTAAGTTCG
CAAGCTAATAATAGACATAAAANAGTCGATACATAACCACCCAATTACCCACCCCATAAACCCTCAACGATCCCCCGAAAGGAAAACAAAGGCCTAAAAG
GATCCCAAAAACTGAAACCAACCCCGCGCTCCTCCCCCCCCAAACCCCCCCTTCTACCACCGTCCTTCCTCAACTATCCTACTCTCACCAACAACCTCCT
CCATTCATCTCCCCCAGCACACAATTGAAAACACACTAACCAAGCAAGACAAAACCTCCTCAAACCAACATCAATACCCAAACGATCCGTATCAATCACT
CATATTAGACGCGCCCTCTGAAGTATCGGTCAAAACCATTACCCAAAC
>LE_HBa0189E21_SP6_106600 (trimmed for quality and cloning vector)
TTCGATTCTCCCTCTCTCTCTTTGTTCTTTCTAGTCTTTTTGAGCCAACTCCCTTTCTTTTACCCTAATTAGCATATTTTTAAGTATAATTTTATGGGAA
GAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAGCCCCCAAGTAATTTTTTTAGAAATATTAAACCACTAACTTTATAATTATAAGCGGGAAGAGA
CAAAAACGTCCCTTAAACATTAAAGAAATCCGACTCCGCTTGGGATTACTTCATCGTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCG
TCACCGAGTTCAGAGACTGAAATTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.956581
Expected error %
2.58172
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0189E21
Clone
Clone name
hba-189e21
LE_HBa0189E21
C03HBa0189E21
P189E21
Clone type
BAC
Contamination
none
Estimated length
155,929
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found