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Clone Read LE_HBa0173L24_T7_105407

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173L24_T7_105407
Primer
T7
ID from Seq. Facility
LE_HBa_173_L24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
434 trimmed for vector and quality, 762 raw
Sequence
>LE_HBa0173L24_T7_105407 (raw untrimmed)
GCCGGGATCCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAATACAATAATTTTTAAAAACCATTATTATGTTAAATTAAAATTATGTCA
AAGTACCTTTTACTTTTCTGACATAAAACATAGCACATAAAAAACTAAAATTAAAATATTATAAAAAAAAATCATCTTTTCAAAATAAACTAAAAAGAAA
AATAAATCATTCCTTTCTTAACAGTCTCACATGTTATATGTTATTTTTGAAAAAATATATATTAATAATCTAAATATCAAATTTTAATAAAAACACATTT
ACTCATTTTTATATAACAATAAAAGAAGTGCTTTATAAGTAGAAATGGAATTTCTATTACAGTCACCAGTCTCAATTATAAATTTTAAATTAAACTAAAT
TAAATATAAAATTATATGCATCTAATATCCCTTTTGTACTGAACAAAAACTTTAAAATAAAATGATATTCTAGTGGGTTCATTGGAGCGGGTACAACTAA
TCTTATCTGGGTTTCATTTGGACGCTGGGTTTCCAGCCTAAAATATAAACCTCCCGGTTCGGGTCTAATGACCTTGCCTAGAATAGACATGAAATTTGGG
AAAATAAAGAAGAATTTTGTATAAAGAGGTTTTTAAATTTAAGTATATGCCCAAATTATAAAAATAATAATTTTTTTATTAATCTTCCTGGGCTTTAAAA
GATATTCTCCGTTGGAAATAAATTATTTGTGAAATTGCTAAGTGTTAATATATGTTTAATTT
>LE_HBa0173L24_T7_105407 (trimmed for quality and cloning vector)
AGCTTAATACAATAATTTTTAAAAACCATTATTATGTTAAATTAAAATTATGTCAAAGTACCTTTTACTTTTCTGACATAAAACATAGCACATAAAAAAC
TAAAATTAAAATATTATAAAAAAAAATCATCTTTTCAAAATAAACTAAAAAGAAAAATAAATCATTCCTTTCTTAACAGTCTCACATGTTATATGTTATT
TTTGAAAAAATATATATTAATAATCTAAATATCAAATTTTAATAAAAACACATTTACTCATTTTTATATAACAATAAAAGAAGTGCTTTATAAGTAGAAA
TGGAATTTCTATTACAGTCACCAGTCTCAATTATAAATTTTAAATTAAACTAAATTAAATATAAAATTATATGCATCTAATATCCCTTTTGTACTGAACA
AAAACTTTAAAATAAAATGATATTCTAGTGGGTT

This is probably not a useful sequence.

Problems:
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.821373
Expected error %
2.08648
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173L24
Clone
Clone name
hba-173l24
LE_HBa0173L24
C12HBa0173L24
P173L24
Clone type
BAC
Contamination
none
Estimated length
100,785
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found