Clone Read LE_HBa0173C12_SP6_104950

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173C12_SP6_104950
Primer
SP6
ID from Seq. Facility
LE_HBa_173_C12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
710 trimmed for vector and quality, 871 raw
Sequence
>LE_HBa0173C12_SP6_104950 (raw untrimmed)
CGGGGTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGTTCGTTATTGCCAAATATTTGCTAATAGAATTTATGGTTTGTCATTAAAGA
AAGAAGATCCAATTGAACTTTCGCTAATTGAATTTGAGGAAATTGCCTCAACAACAAATAACTCAAAGTAGAAAACAAACTCGGTGAAGGAGGATTTGGT
TCAAATTTCTGAATGATAAATAGAGACATGTATAAAGGAATTAGCTAATTAGACTTAACATTTTTAGTCTTTCTGCACCTTTCACTATTTTACAAGATAC
GCTATCCTTAATACAATATATGTGTTTAAATTGATAGACTAAAGCAACTATATAAACTAATTTTTGGTGAACTTAAAAGCTGATGCATGAATTTTAAATT
AGTAACTTCGAATTCTCATGTTCAATAATTGATTCTCTCGTCTTTCATAGATTTTATCCTTGTGAAACTCAATAAAAATACTTTCTCACGTCATACTGAA
GAACAATTATGAAAACTGACCATGGAAAAGTAATTATTTAAGTTGCATAAAATTTCAAAAAAGAAAACAAAATCATCCATGAACATGAATAACTTCAAAG
TCATAACGAAAGAACTGGATCTGAACTTGTGTATGTACTTTATTTAAGGAACTTTTTTTTTCTTGGACCAAGGATCACTTTTCCACCCCTCCTTGCTTCC
TTTAAAAAAGACTTCTTGGAAATTTTAAAATTTGGTACACTTTTGGTGTTCCCATTCTTCCCCGTGAAAAATTAATCTTTGTAATTTTCCCTGGAATGGC
TCCCCAAATTTTTTTGTTAAAAAGAAAAACTGAAAACTCGCCGAATTTTCTCCTTTTGGGGATCACCTTGG
>LE_HBa0173C12_SP6_104950 (trimmed for quality and cloning vector)
AGCTTGTTCGTTATTGCCAAATATTTGCTAATAGAATTTATGGTTTGTCATTAAAGAAAGAAGATCCAATTGAACTTTCGCTAATTGAATTTGAGGAAAT
TGCCTCAACAACAAATAACTCAAAGTAGAAAACAAACTCGGTGAAGGAGGATTTGGTTCAAATTTCTGAATGATAAATAGAGACATGTATAAAGGAATTA
GCTAATTAGACTTAACATTTTTAGTCTTTCTGCACCTTTCACTATTTTACAAGATACGCTATCCTTAATACAATATATGTGTTTAAATTGATAGACTAAA
GCAACTATATAAACTAATTTTTGGTGAACTTAAAAGCTGATGCATGAATTTTAAATTAGTAACTTCGAATTCTCATGTTCAATAATTGATTCTCTCGTCT
TTCATAGATTTTATCCTTGTGAAACTCAATAAAAATACTTTCTCACGTCATACTGAAGAACAATTATGAAAACTGACCATGGAAAAGTAATTATTTAAGT
TGCATAAAATTTCAAAAAAGAAAACAAAATCATCCATGAACATGAATAACTTCAAAGTCATAACGAAAGAACTGGATCTGAACTTGTGTATGTACTTTAT
TTAAGGAACTTTTTTTTTCTTGGACCAAGGATCACTTTTCCACCCCTCCTTGCTTCCTTTAAAAAAGACTTCTTGGAAATTTTAAAATTTGGTACACTTT
TGGTGTTCCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.92114
Expected error %
1.42115
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173C12
Clone
Clone name
hba-173c12
LE_HBa0173C12
P173C12
Clone type
BAC
Contamination
none
Estimated length
114,416
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found