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Clone Read LE_HBa0173A21_T7_104873

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0173A21_T7_104873
Primer
T7
ID from Seq. Facility
LE_HBa_173_A21-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
101 trimmed for vector and quality, 1032 raw
Sequence
>LE_HBa0173A21_T7_104873 (raw untrimmed)
CCCCTTCACCCATCTCATTCTCACAGACCATCCGGAGATCTCAAGAGTCGACCTGCAAGCATGCAAGCTTTTCTTGAATAGATTTCACCTCTCTTTTATG
AATCCCTCAAAAGATCAGTACCCCAAGGTCTAACCTCTTTTGCATCAGACCAACCAATGGGAGACCTACATCTCCTCCCATACAATGCTTCGAAAGGAGC
CACATACAATACTTGAATGATAAATATCGTGGAATGAGAACCTTACTTGTCGTATGAGAACTTTGTATAAACGGCAGGAAATTATCTACTATGACCGGCA
CAATTCATATCACATCACACATAGAGTCAAAGTACACTACTCCCACAAATCGAAATCGAATCGACTCACCACAGATCTATCATGTTCTGATCGGTGATGA
TGCAATTTGCAAACTGATCACATGCCCTCATACCCTACTATCTTATATCTCTAACGATGCCCATTGACTCCTCCCATAAACACTCAGAAAGTAAACCCTG
TCCTCCACCCCCTATACCAGAAAACCGGATAGAGCGAGATGCTGACCTCTCACCGCACTCTCCCCTAACCTATTTTTATATTAAAATAATAACACGCCCC
TGGTCTTTAACTCTTCTCCTCTCATTATATCTAGTCCTGCTTCTTAGTACAGGGAAAAGGTACACTAAAACGACTACCTATAGCATCAAATCTCTGTTCT
ACACCAATCAATCCTTAAATTAAAACATTCTACACATTATCCCCCCTAATGGTGTTTTTGGATACAAACTCCAACCTCCCTTAACTACCCCCTTTCCTAC
ATATCTTCTTATCCTACCCTTTCCCCTTTCTAAAGAAAAGTAGGGGGAACATCCTCCCTTCAAAGTGATTTCCCACTCTCGGGTCACTCCCCGTGGCTGT
TTCAATTAAATCTGTTAACCACACCCCTCAAACCAACACTGTAGGAACCAATTTATCTTGCTCAAAAAAGAAAAAAACAACCACATTATAGGTTCTCTCA
GTCTCTCTTGTAACATTTTATACGCCTTTCTT
>LE_HBa0173A21_T7_104873 (trimmed for quality and cloning vector)
ATGAATCCCTCAAAAGATCAGTACCCCAAGGTCTAACCTCTTTTGCATCAGACCAACCAATGGGAGACCTACATCTCCTCCCATACAATGCTTCGAAAGG
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.908237
Expected error %
0.603071
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0173A21
Clone
Clone name
hba-173a21
LE_HBa0173A21
C07HBa0173A21
P173A21
Clone type
BAC
Contamination
none
Estimated length
99,133
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found