Clone Read LE_HBa0162I07_SP6_103692

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162I07_SP6_103692
Primer
SP6
ID from Seq. Facility
LE_HBa_162_I07-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1237 raw
Sequence
>LE_HBa0162I07_SP6_103692 (raw untrimmed)
AGCGCAAGGCGCCGGGAGTGCGACAGAGGGAGGCGGGAGTGGGAGCTAAGTATGTCTGAGCTACTAATGAGGATGATGTTTTAGGTGATGATACCCCCTT
TCTTGTCGGACCGTGGGTACGAACGGTTGAGAGGTCTATGAGGCTCGCCTTTTCTTGTGCGATCTCTCACTACCGCAGGGGTACCCGTGTGACCGACGAG
ATGAGATCGCCCGGAGCTGACGCGTGGACCTGTTACTGTGCGTGTTTATCGGGGCGGGCGTACAGCTCCTTCTTGTTAGTAATCTGCGGCGGCCTGGTGA
TTGTGTGTTCTACTACCCTGTACCTCCTCCTCTCGCTCCTGTCACTCCATTATTCCTGTTCTTTTGTCAGCACTTTGCTCTCTTTGCTGCGTATACTTCT
TATCGCACATGTCTGTGCACTCTTCACAGCTCNGACACCCTCGGTTCTCGACCCTCGGATGACGTGGACGATGCAGTGCCCATCCCTATCGCCTCGCAGA
CCGCTCTCCCACGGCCATGCGTCTCACCGGCGCTGNTCAACACGGCCACTACACTATACTGCCTTCATGCTCTTTCTGCATGGCTCTTATTCAGTGTACC
ACTCCTCCCACTACTTGCGCCGGCGCTACGTCGTCTCCCTGACCCTCTCTGTCGACAATCCCTGCTCCGGCGTGCCCGCGCGCCCTACTGACCCACTCTG
ATCACCTCTCTCCCCCTCATCCCTGANCTGCCACACCGTGCCATCCTTCGCATCTACCCCGCCGGCCCCGCTGTGCGTGCGTGCGACGGCTGCACGACCT
CAAGTGACCGACGACGCAGCGCTCATCATTAGGCNTCCTGTCTGAACGCGCATTGTTGCCTTCTCTTTAGCGACGCCCGCTACGTCGCTGACCTCTATCT
ATGTGATCTATGGCTATCGCACTTCTTGATATCTCCTGCAATCTAGACTATTACGCTCTTCTCTCTATCATTCTGCGAGTCACATGCTCTTCATCCCGGT
CTCTCACTCTTACTCTAGCTTGCCTCTCTTTGCTCCTATTGTCCTGTCGCTATACCTGCTTCCCATGTTCACGCTTCCCTCTTATCTCGCTCTTGCGACT
CCCGCTACGCGTTCTTCGTACTGCTTACTCGGGGCTCTCTCGCCATCCGCCTGCGTCCACCACAACCATCGCCCACCNCTGTCACAGAGCGCCAGGACGG
CGTGACGTTCTGCACTGTATTGAGACGGCACTGAGGC
>LE_HBa0162I07_SP6_103692 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162I07
Clone
Clone name
hba-162i7
LE_HBa0162I07
P162I07
Clone type
BAC
Contamination
none
Estimated length
73,596
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found