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Clone Read LE_HBa0162B22_T7_103387

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162B22_T7_103387
Primer
T7
ID from Seq. Facility
LE_HBa_162_B22-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
739 trimmed for vector and quality, 792 raw
Genbank Accession
DU093714
Sequence
>LE_HBa0162B22_T7_103387 (raw untrimmed)
CCCGGTACCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCAATTAACCCATAATGACATATCATTTTAGTTTTTTTTCTAAACGAAAAGG
ACATTAATAAACCAACTTTTAACATATGCCATAAATAAAAAAAATTCAATGTTTTTGTGGTATATTTAGTTTCGTTTCCCAAATTTTAATTGATTTAATA
AAGGAAAAATTGTATATAATAGCAAACTAATAACCTAAAATAAATGGAATAGCTAGGGTTTGATTTAATTGTGCTCCATAACAAACGTTAACTAAAATTT
GCCAGCGTCTCTCTCCCAGAAATCTCGCTCGCCACTCTCTATTCTCGCTTGCCTCTCTCACTTTATACACATAAGTGTATAATTCTGTTTCTGTTTTGTA
TAAAGCGAGAGAAAATTGTATATACACATGAAAAAATATATCTTCGTGTTATACACTTATTTATACAATTTACAAACATTTTACTTCAAATATTGCAGAG
AAAAAGGTCAACGAATAATACAATTGCGAATTATTCTTCAATAGTTCATCTATATGCATTTTGAATTCTTCTAAATTATCAAAATTATATTTTAATGGTT
TTTGTGTTATTATACTATTTTCATCTATTAATTCAATTTTTACTTTCATCTTATGTTTTTCCCATCCTTGTAATGAATTTTCACTATATAATAATTCTTG
TTGTTTCGTTAATTTTTCTAACTCTATCTATTGTAAGTATGATAATTTCTAATTGTGTTATTTGATTTTTTACTATATTTTTCCTTTCCCTG
>LE_HBa0162B22_T7_103387 (trimmed for quality and cloning vector)
AGCTTTCAATTAACCCATAATGACATATCATTTTAGTTTTTTTTCTAAACGAAAAGGACATTAATAAACCAACTTTTAACATATGCCATAAATAAAAAAA
ATTCAATGTTTTTGTGGTATATTTAGTTTCGTTTCCCAAATTTTAATTGATTTAATAAAGGAAAAATTGTATATAATAGCAAACTAATAACCTAAAATAA
ATGGAATAGCTAGGGTTTGATTTAATTGTGCTCCATAACAAACGTTAACTAAAATTTGCCAGCGTCTCTCTCCCAGAAATCTCGCTCGCCACTCTCTATT
CTCGCTTGCCTCTCTCACTTTATACACATAAGTGTATAATTCTGTTTCTGTTTTGTATAAAGCGAGAGAAAATTGTATATACACATGAAAAAATATATCT
TCGTGTTATACACTTATTTATACAATTTACAAACATTTTACTTCAAATATTGCAGAGAAAAAGGTCAACGAATAATACAATTGCGAATTATTCTTCAATA
GTTCATCTATATGCATTTTGAATTCTTCTAAATTATCAAAATTATATTTTAATGGTTTTTGTGTTATTATACTATTTTCATCTATTAATTCAATTTTTAC
TTTCATCTTATGTTTTTCCCATCCTTGTAATGAATTTTCACTATATAATAATTCTTGTTGTTTCGTTAATTTTTCTAACTCTATCTATTGTAAGTATGAT
AATTTCTAATTGTGTTATTTGATTTTTTACTATATTTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.896185
Expected error %
1.03238
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAC88794.1| Score 94 E Value 5e-18 Identity 26.90% Align. Length 155bp (20.97%) Frame 2
putative polyprotein [Nicotiana tabacum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
emb|CAC88785.1| Score 93 E Value 8e-18 Identity 26.40% Align. Length 158bp (21.38%) Frame 2
putative polyprotein [Nicotiana tabacum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162B22
Clone
Clone name
hba-162b22
LE_HBa0162B22
P162B22
Clone type
BAC
Contamination
none
Estimated length
82,768
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found