Clone Read LE_HBa0162A03_SP6_103300

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0162A03_SP6_103300
Primer
SP6
ID from Seq. Facility
LE_HBa_162_A03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
668 trimmed for vector and quality, 828 raw
Genbank Accession
Sequence
>LE_HBa0162A03_SP6_103300 (raw untrimmed)
GTTTTTCCTACCCTGTGTGATGATGAGTGATGACACTCTACAATCTGATGATTGGCATGCAAATGCACTTAGCATTTTAGGCCCATCATGTTCAAAGTGA
AACCAATGCTGAAACTTTTAGGGCCCCCCCATGAAGATGTGTCATNAAACCNAGAAAGCGNAAATTTTGCCCTTTTTTCTTTTACTTCTCTTTGTTTTTG
GGAGAGGTGGGAAGATAGCAATTTTATATAATGCATTGCTCCTTAATATAAAATAAAAAGGGAAAATGATGCACCATACTATGGCTGGAAATTCTAGAAC
GGTCATAACATAAACTCCCACGAAGACAAACAAGTACTTGCAAATCTGCCGTATCAAGATATGCAAACTTTTGATCTCCTGAACACTGAGATTCATTGTA
AGCCAGTCATCAGCAGACCACAAGAGTTCCTAAATACAATTTTTTTCTGAAGTAACAAGAACAAGCAGGAGTTCCTCTCTTAACATTCCTGTGTAAACCT
TATTTTTTCAAGAGACGTGATATAACGATCAAAAAGAAGTTGAGCCCAAAAAAACAAAAAGCTTTGCATAATTGAAACTCTTCACTGAATAATCATCACA
TGATGACACCCTAAAGAGCAGTATGTCACCTTAGGAAATGGAAGTTCCAAAACAATAACCAATAAAGGGAAAATGGGGCCAGTAGGCAATGATATTACAA
ACAGGGAAAAGCTAACCGACATTACCCACTTATTTTATACTACCTTAAGAAGGAACTAAATGGAATGACCAATTTGTAAAAGAAGAGCTTTCCCTTCCCC
CACACCCAAACCCAAATTTTAAAACCCC
>LE_HBa0162A03_SP6_103300 (trimmed for quality and cloning vector)
GTGATGATGAGTGATGACACTCTACAATCTGATGATTGGCATGCAAATGCACTTAGCATTTTAGGCCCATCATGTTCAAAGTGAAACCAATGCTGAAACT
TTTAGGGCCCCCCCATGAAGATGTGTCATNAAACCNAGAAAGCGNAAATTTTGCCCTTTTTTCTTTTACTTCTCTTTGTTTTTGGGAGAGGTGGGAAGAT
AGCAATTTTATATAATGCATTGCTCCTTAATATAAAATAAAAAGGGAAAATGATGCACCATACTATGGCTGGAAATTCTAGAACGGTCATAACATAAACT
CCCACGAAGACAAACAAGTACTTGCAAATCTGCCGTATCAAGATATGCAAACTTTTGATCTCCTGAACACTGAGATTCATTGTAAGCCAGTCATCAGCAG
ACCACAAGAGTTCCTAAATACAATTTTTTTCTGAAGTAACAAGAACAAGCAGGAGTTCCTCTCTTAACATTCCTGTGTAAACCTTATTTTTTCAAGAGAC
GTGATATAACGATCAAAAAGAAGTTGAGCCCAAAAAAACAAAAAGCTTTGCATAATTGAAACTCTTCACTGAATAATCATCACATGATGACACCCTAAAG
AGCAGTATGTCACCTTAGGAAATGGAAGTTCCAAAACAATAACCAATAAAGGGAAAATGGGGCCAGTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.971384
Expected error %
1.85495
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0162A03
Clone
Clone name
hba-162a3
LE_HBa0162A03
P162A03
Clone type
BAC
Contamination
none
Estimated length
82,272
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found