Clone Read LE_HBa0156N03_SP6_102388

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156N03_SP6_102388
Primer
SP6
ID from Seq. Facility
LE_HBa_156_N03-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1723 raw
Sequence
>LE_HBa0156N03_SP6_102388 (raw untrimmed)
AAAGAGTTCCGTGGGGGGGGCAGTGCTCATCNTNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATTAAGGGGNGAGGGG
GGGGGGGGGGGGGGGAGGAGGACCCTTTAGGGGGAGGAAAAAAAAAGAGGGAAAAGGGGAAGGAGAAGGGAGAGGGAAGNAGGAGNAGAGGGGGGAGAGG
GNAGAGGAAGANGAGGAGAAGAGAGAAAGAAGAAGAAGAGAAAGNGAGGGAAGGGAAGAGAAAGAGGGAGGANGAGAAAAAANNNNANAGGAAGGGGNGG
AGGAAGANAAAGAAGGAGGGAGGAAGAGGGGGGNGAGAGGGAGGGAAGAAAAGAAAAAAGAGAAAAGAAGAGGANGAAAAGAAAAAGGAGGGGAAGAAGG
GGAAGGAAGAAGGAGGGAAAGAGAAGAAAAAAGAAAAAGAGAGGGAANAGANAAGAAGGAGGGAGGGGAAGGGGGAGGAGGAAAGGAAAANNGAGGAAAN
GAGGGAAAGGGAGANGGAGAGAGAAGGGAGAAAGAAGGGAAAGGAGAAGGAAAGGAAGAGAAGGGGAAGAGAAGGGGGAAAAGGGAAGGAAGAGGGAANG
GGGAGGGGGGAGGGAAAAGNGGAGGGAGAGAGGGAGAAGNGAGAGGAAGAAAANGAGGGGAGAAGAGAGGGAGGAGAAGGAAAGAAAGAGAGGGAAAAGA
GAANGANGAANAGGGAAGGAAGGGGAGGGGAGAGAAAGAAAAGAANGANNGAANANAGGNGAGANGAAANAAAANAAAAAAAAAAANAAAAAAANGGGAA
ANNNGNAAAGGGGGGGAAAAAAAAAAAAAAAAAAAANGGNNAAAAGNNNNAAAAAAANNNNAAAANNNNNNGGGGGGGGGGGNNNNNNANNNAANGGGGG
NANNAAAGAGGGAANNGGGGGGGGGAGGGAAANNGGGGGAANAAGGGGGGGGGGGAAAGGGGGGNAGGGGAGGGGAGGNGAAAAGAAGAAGGGGNNGGAA
AAAGAGGAGGGGGNNNGGGGGAGAGGGGNNGGGGGGGGAAAAAAAAAAAAAAAGGGGGGGGGGGNNNNGGGGGGNNGGGAAAAAAANNGGGGGGGGGGGG
ANGGGGGGGAAAGAGGAAAAGAAAAAAAGAAAGGGGGGNNAGAAAAANNNNGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGAGAGGGGGGGGG
GAGAGGAAAANNAAAAAGAAAAAGGGGAAAAGGGGGGGGGGGGAAAAAGGGAAGGGGAAAAAAGGAAAANGAAAAAAAANNGNAAAAGGGGGGGANAAAG
GGGAAGGGGGGGGGGGGGANGGGGAGGGGGGGGGGAGGGGGGAAAAAGGGGNNNGGNGGGGGGGGAAAAGGGGGGGGGGAGGGGGGGGGNGGAAAAAAGG
GGGAAAANGGGNNAANNGGGGGGAANAAAAAANGGGGGGGNNNNGGNANNGGNNNGNNAAAANGAAAANNNNAAAGGGGNNNNNNNGGAAAAAAAAAAAA
AAAGGGAAAAAGGAAAAAAAAAAAAAGNNNNGGGGGNNNNNNGGGGGGAAAGAAAAAAAAAAANNNGGGGGGGGNNAAAAAAGGGGGGGGGNNAAAAGGG
GGGNNGGAAANAAAANNAAAAAANGGGGAANGGGGGGGGGANNGNNAAGNNNNNNGGGNNAAAAAAAAANNGGGAAAAAAGAAGGGGAAAAAAAAAAANG
GGGGAAAAGGGGGNNNNGGNNNN
>LE_HBa0156N03_SP6_102388 (trimmed for quality and cloning vector)
AAAAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.427271
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156N03
Clone
Clone name
hba-156n3
LE_HBa0156N03
P156N03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found