Clone Read LE_HBa0156K11_T7_102261

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156K11_T7_102261
Primer
T7
ID from Seq. Facility
LE_HBa_156_K11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1552 raw
Sequence
>LE_HBa0156K11_T7_102261 (raw untrimmed)
CAACTTTTGGATGNTGTACGAGTAANTNTNGTNAGAAGAGCGTAGAGGAANCATNTAGTACTCTCTCATATNGCTAGACNCTGNAAGATNTAGTGGGNGA
TACNATTGATTNATCAGCCTGCTCCANTCGNNGTCNNCACATGCTCACGGATCGACTCAGTCNGTTCTGTNCNCNCGCTTACNAGACACTCNCGCACNCG
GCAATGGATGTTTNCTGCGTGACNACTTCGACTCTATNGACTAGATACAAATGTCAGTACGNATATAGGTGAGCGAGCCGNANATTNTTAGCCTGTTAGC
NAGTTAAAGTCTGATTCGGCTGAGAGCGCGCACGTTANTNANGCTATGTNCNTNCGTCANCACGCATAGTCTNANTGTATACAATATACANGCATCGCGG
CCACNGATNCGTNATNGNTGNTNAGCGAGTCTGTAGCTTCTGTGCGANCGCANTGANACTGCTCTACGTGAGAGTTNGCTGTTCGTCAGAAANANCGTCA
GAGATNGATGGCATAGGCAACTCTNACGCGCTGCTGTGACAATGTGCTANGAACGCAGACGCATCTCATGGTTGTACTGTTTNGATTATGATTGANCTAC
GTGTTCGTAGCAGTGTTNTGCGTNAGTGCTATGCGATGGTGCTATAGCNTGACTGGATCTGTACATGTCANGGAGTGACGTGCGATAACTGTGTCTTTGA
TCGCTANAGAGATNCTATACATAGTGTNCNTAATNCATCGTGACAGACTGATACATATGCGCACAACACGCACTAGTCAGCAACTGCATCTCTNCAACGA
ACTNGCTCACGAATGACGAGCACTACACANACATGGACGGATAACACATACGAGTACACATCGATCTCACTATATCTGTGCTAGGTCTGTCAGATATGTG
TCGNATACTTCATGCAGCTCGTCNTATTNCTGCTATACCCACTAGCACTGATACACACGATAGCAGTCACGGTGCGAGCGCACAGTGGTCAGACACAGCG
TAATATCGACTATTCACTGCATAGAGTGCTGAGTNGACACGATGACTGATGATGAANCACAACTNATATGCACACATGATGCGGTGANCTTGCGCTCATN
GNCGNTACGCATCGTACGATACGCCGTGTGCTCAGACGTCGACGATATGCTATACGTGGTCGCGCGGCGTACACTGGTGACACCGTCGCGCTGCTTANCC
TACGTCGCANTGANCTGTCACACGCTCNGCGAGACTGCGCATACGACGTGCTCGCGATCTACTCATAGCACGGAGGTCTACACNGCCGGCATATCGCTAC
ACGATACACTCTCATGATATCCCGACGCCTGTGCATCGATCATACTGCTGCGGCGGCNCGGTCGACGCGCTGCTCGCACACCTGGCGCANGCTGTGCGAC
TGTCTCGTCGCNGCTCGAAGATCGCNTGAATGATGGTCATGTGCTATTACANCNCGAGGGTGAGCACTGCGTGTGTGCTACATTGTAGGACGCGCTGTCN
GCGTGGCGCGTGNATGTGTCGCTGGGCGCGAGCGGCTGTGCGANTGCNGCGC
>LE_HBa0156K11_T7_102261 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.70673
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156K11
Clone
Clone name
hba-156k11
LE_HBa0156K11
P156K11
Clone type
BAC
Contamination
none
Estimated length
116,527
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found