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Clone Read LE_HBa0156E07_SP6_101964

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0156E07_SP6_101964
Primer
SP6
ID from Seq. Facility
LE_HBa_156_E07-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 788 raw
Sequence
>LE_HBa0156E07_SP6_101964 (raw untrimmed)
GACTCCCTTCTCATGTAGCCGAGAGACATTCCTTTTTTTTGGCGGGGAACTCTGAAAANTGANGGACGCTCCANTNGGAATATGTCGGGNGGAACATCTC
GTCTCATGAGGGAGCGGCAACATATAGGCCCATGTATGCCGCATTGTATGGT
TTGGTGGGTTCGCATTTATAAATGTCGGGAAAAAACCTGATCGTATGT
GGAAAAGCTGGATAAACTCAACCATGAACAAGAGCATCTTGACTCACTTATGCGTAATTTGATAAGTTGTTAGAGAGATCTCCTCCATTCTGAAATAGAT
AGGTGTATTGAATACAGGATATGTAGTCAGTTATTGTGTGTTTATATTTGCTGGTAATTCTTCTTTTCTCATTCTGTATTTTCATTGTCTTGATAGCTAT
CTTTTCCTCTACTGATCACACGTACTATTTGTAAAGTTCTGTTCCTGAGAAAGTAGATCATCTTTATGGTGCTGGTGTGCTCGAGGGCGCGTACGTCCTG
CTGACATCAGTGCAGCTGACTAGCGAGGATGNGTTGTAATAACTCTCTTATAATAGACTGTCAAACTCAGCAATTTAGTACTAATGGAATATTATTTTAA
TGTCGACCAAGGCGGTTTTTTTAAATTTTATCCTTCTCTCATTTATTCTTGTGTTATAATCAGTGGTTAGTGTCAACTACACTTTAGACACCTACTCGAT
CATTTAGGTTTTGTTATCTAGGGTAATTTTTATGGGTAGGAATATCTCAATAGAAGTTGGGTATCATGAGATGCTTGTGTGTCTTATT
>LE_HBa0156E07_SP6_101964 (trimmed for quality and cloning vector)
TTGGTGG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.826253
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0156E07
Clone
Clone name
hba-156e7
LE_HBa0156E07
P156E07
Clone type
BAC
Contamination
none
Estimated length
101,829
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found