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Clone Read LE_HBa0148A08_SP6_101006

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0148A08_SP6_101006
Primer
SP6
ID from Seq. Facility
LE_HBa_148_A08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
225 trimmed for vector and quality, 906 raw
Genbank Accession
DU091716
Sequence
>LE_HBa0148A08_SP6_101006 (raw untrimmed)
GCCAACATTTTTTTTTGGGATTGTGAGCTTTTCTAAATTTGTAATTGTGTCTAGCAGGTTATGGGATTGGTCTGCTGTTCGTAATTGTGTGTATGTATAT
ATATACATACACAGACCTTGGGGGAGAGAGGAGTGTTGCCTTGGGCAGCAGACACAGTCGGACATTTGGCATGGCAGTGCCATTATTGCCCTTGGAATGC
ACACATGGTCGGACGACATCAGGCAAGGTGTTTCATCATTGCCCTTAAAAAGCATACTCTATTAGACTACATCTGTCATGGCTTGTTATCTATGCCCTTA
GACATCACACTCGATCGGACTACCTATGGCGTGGAATGCCCTCATGGACCTTACGTAACACATCTCAATGGATGACCTCAGACGTGGCATGCCTTCATCG
TCATTAGGCAGCTCACGCGGTCGGACGACGTCTGGCTTGACATGACATCTTCGCCATTGGATAACACATATGGTGGGATGACGTCCGGGCGAGTCTTGCC
ACCTTTCCCCTTGTTACAACGTTCATGGTTCGACAACTTCGGGCGTGTCATGACATCTCTACCCTTATTGCACGAATATCAGCATTTTTCATCTCCCTAT
TTTAGAACAAACTATTCGATCGATTACGACAGCGCCTTGCTCGTTCAAATCCTCCGCACGTATCCAGTTGGTCGCAGGGGGGCTTTGAATCCCTTATCGC
GGTTGGGCCGCCAACGCGGCTATACTACGCCTCTGTGTCCCTTCTAAGCTATGCTATGTTCCCTTTCGGAAGGAGAGCTGGTGCGAGATATGATTCTTCA
CCACATACGCTACCACAGGTTTTATCTCTCTTGTAGTTTTTCATCTCTTGCCTGACTCTTATATGCACACACTGTCTTCTATATTACTTCTTTATACTAA
ATTAAA
>LE_HBa0148A08_SP6_101006 (trimmed for quality and cloning vector)
TTGTGAGCTTTTCTAAATTTGTAATTGTGTCTAGCAGGTTATGGGATTGGTCTGCTGTTCGTAATTGTGTGTATGTATATATATACATACACAGACCTTG
GGGGAGAGAGGAGTGTTGCCTTGGGCAGCAGACACAGTCGGACATTTGGCATGGCAGTGCCATTATTGCCCTTGGAATGCACACATGGTCGGACGACATC
AGGCAAGGTGTTTCATCATTGCCCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.930645
Expected error %
1.57575
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0148A08
Clone
Clone name
hba-148a8
LE_HBa0148A08
C08HBa0148A08
P148A08
Clone type
BAC
Contamination
none
Estimated length
72,681
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found