Clone hba-169m21
 Clone and library
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Clone and library
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| Physical mapping
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| Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg3272 : [coherent], 1 members:
C05HBa0169M21
| Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
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Conflicted matches
None
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| Marker matches - BLAST |
| Marker matches - manual |
| Physical map (from marker matches) |
| FISH map |
| FISH images |
| SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
|---|---|---|---|---|
| 298-06 1 | Composite | Fluorescence | Phase | 59.9% |
| 298-08 1 | Composite | Fluorescence | Phase | 65.0% |
| 298-09 1 | Composite | Fluorescence | Phase | 61.5% |
| 298-13 1 | Composite | Fluorescence | Phase | 63.7% |
| 298-14 1 | Composite | Fluorescence | Phase | 61.5% |
| 298-18 1 | Composite | Fluorescence | Phase | 64.0% |
| 298-22 1 | Composite | Fluorescence | Phase | 57.6% |
| 298-30 1 | Composite | Fluorescence | Phase | 63.3% |
| 298-35 1 | Composite | Fluorescence | Phase | 62.3% |
| 298-36 1 | Composite | Fluorescence | Phase | 67.8% |
| 298-38b 1 | Composite | Fluorescence | Phase | 57.5% |
| 298-39 1 | Composite | Fluorescence | Phase | 64.6% |
| 298-40 1 | Composite | Fluorescence | Phase | 65.2% |
| 298-41 1 | Composite | Fluorescence | Phase | 60.8% |
| 298-44 1 | Composite | Fluorescence | Phase | 65.8% |
| 298-47 1 | Composite | Fluorescence | Phase | 61.1% |
| Mean±sd | 62.6%±2.9% | |||
Given an estimated length of 7.7µm for chromosome 5Q and the mean percentage above, this BAC is approximately 4.8µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
| IL Mapping |
| Sequencing
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This clone is being sequenced by the Chromosome 5 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 5
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HTGS phase
none
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Sequencing Status
in_progress
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
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Warnings
none
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FTP | |
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Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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| Annotations
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Browse
LE_HBa0169M21 has no browsable sequence annotations
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Download
temporarily unavailable
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Working
