Clone hba-178o2
 Clone and library
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Clone and library
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| Physical mapping
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| Fingerprint Contig Builds (FPC) |
- not present in Tomato FPC (AGI 2005)
| Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
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Conflicted matches
None
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| Marker matches - BLAST |
| Marker matches - manual |
| Physical map (from marker matches) |
| FISH map |
| FISH images |
| SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
|---|---|---|---|---|
| 373-02 1 | Composite | Fluorescence | Phase | 87.8% |
| 350-11 1 | Composite | Fluorescence | Phase | 86.9% |
| 373-16 1 | Composite | Fluorescence | Phase | 87.8% |
| 350-21a 1 | Composite | Fluorescence | Phase | 88.9% |
| 350-21b 1 | Composite | Fluorescence | Phase | 88.0% |
| 350-26 1 | Composite | Fluorescence | Phase | 88.8% |
| 373-28 1 | Composite | Fluorescence | Phase | 88.5% |
| 373-29 1 | Composite | Fluorescence | Phase | 90.0% |
| 373-30 1 | Composite | Fluorescence | Phase | 90.9% |
| 350-36 1 | Composite | Fluorescence | Phase | 87.0% |
| 373-36 1 | Composite | Fluorescence | Phase | 89.5% |
| 350-37 1 | Composite | Fluorescence | Phase | 90.7% |
| 373-38 1 | Composite | Fluorescence | Phase | 90.1% |
| 350-39 1 | Composite | Fluorescence | Phase | 89.0% |
| 350-41 1 | Composite | Fluorescence | Phase | 89.7% |
| 373-41 1 | Composite | Fluorescence | Phase | 89.2% |
| 350-42 1 | Composite | Fluorescence | Phase | 86.3% |
| 350-43 1 | Composite | Fluorescence | Phase | 90.0% |
| 350-44 1 | Composite | Fluorescence | Phase | 88.2% |
| 350-45 1 | Composite | Fluorescence | Phase | 87.0% |
| Mean±sd | 88.7%±1.3% | |||
Given an estimated length of 10.8µm for chromosome 7Q and the mean percentage above, this BAC is approximately 9.6µm±0.1µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
| IL Mapping |
| Sequencing
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This clone is not assigned to any sequencing project.
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Sequencing Project
none
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HTGS phase
none
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Sequencing Status
none
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
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Warnings
none
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FTP | |
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Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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| Annotations
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Browse
LE_HBa0178O02 has no browsable sequence annotations
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Download
temporarily unavailable
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| User comments | [Add comment] |
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