Clone hba-231m15
 Clone and library
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Clone and library
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| Physical mapping
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| Fingerprint Contig Builds (FPC) |
- Tomato FPC (AGI 2005)
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ctg1400 : [coherent], 7 members:
LE_HBa0032N15, LE_HBa0091I01, LE_HBa0176J23, LE_HBa0216E07, LE_HBa0221I19, LE_HBa0231M15, LE_HBa0284F16
| Marker matches - overgo what's this? |
Plausible matches
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Additional Info | ||||||||
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Conflicted matches
None
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| Marker matches - BLAST |
| Marker matches - manual |
| Physical map (from marker matches) |
| FISH map |
| FISH images |
| SC Spread ID | Images | Distance from centromere (percentage of arm length) | ||
|---|---|---|---|---|
| 646-13 1 | Composite | Fluorescence | Phase | 99.1% |
| 646-18 1 | Composite | Fluorescence | Phase | 99.0% |
| 646-21 1 | Composite | Fluorescence | Phase | 99.3% |
| 646-28 1 | Composite | Fluorescence | Phase | 100.0% |
| 646-29 1 | Composite | Fluorescence | Phase | 100.0% |
| 646-41 1 | Composite | Fluorescence | Phase | 97.8% |
| 646-42 1 | Composite | Fluorescence | Phase | 98.1% |
| 646-43 1 | Composite | Fluorescence | Phase | 98.2% |
| 646-45 1 | Composite | Fluorescence | Phase | 99.0% |
| 646-51 1 | Composite | Fluorescence | Phase | 100.0% |
| 646-53 1 | Composite | Fluorescence | Phase | 98.2% |
| 646-56 1 | Composite | Fluorescence | Phase | 100.0% |
| 646-57 1 | Composite | Fluorescence | Phase | 99.1% |
| 646-59 1 | Composite | Fluorescence | Phase | 98.3% |
| 646-62 1 | Composite | Fluorescence | Phase | 100.0% |
| Mean±sd | 99.1%±0.8% | |||
Given an estimated length of 20.1µm for chromosome 1Q and the mean percentage above, this BAC is approximately 19.9µm±0.2µm from the chromosome centromere.
1Experiment conducted in the lab of Stephen Stack at Colorado State University.
| IL Mapping |
| Sequencing
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This clone is not assigned to any sequencing project.
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Sequencing Project
none
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HTGS phase
none
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Sequencing Status
none
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Sequencing Organization
not recorded
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Full Sequence
Sequence not available.
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End Sequences
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Warnings
none
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FTP | |
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Chromosome Assembly
this clone is not part of a chromosome assembly
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Restriction Fragments
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| Annotations
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Browse
LE_HBa0231M15 has no browsable sequence annotations
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Download
temporarily unavailable
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| User comments | [Add comment] |
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