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Tomato locus LES245570 Rab11 GTPase
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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![]() ![]() | [Associate accession] |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc07g055290.2 SL2.50ch07:63378793..63373504 (sequence from reverse strand)
GAGTCCTCACCCCATTTCTCCGCCTTCAAGAATTTATTTTTTTCTTCTTCAAAATTGAATCTTTTCAGTGAACTTTTACTATTTGGTCAATCAAGAAGTGAAATTACAGAGCAAAAGCAGATATAGTTTTGAAGATGGCAGGTTACAGAGGTGATGATGAGTATGATTACCTTTTCAAGCTTGTGTTGATAGGTGATTCAGGTGTGGGTAAATCTAATCTGCTTTCCAGGTTCACCAAAAATGAATTCAATTTGGAGTCTAAATCAACTATTGGGGTTGAATTTGCAACCAAAAGTCTTAATATTGATGGTAAAGTTATTAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTAAAGGTTAAATCTTTGAACTTTTTTTTGTTTTGTATTGGTGATATTCACTCAGTATGTTAGTTTTTGTGTTTCTATATCTGGGGTTTTCTTGTTTTTGGTTTATGGCTTGAGTTTTAGTGTTTTTTGTTGATTGGTTGCATAGTTTTGGTGTAACAGTCTTTTTACTAGTGATTGAGTCTGCATCTGTTTATTTTGAAGTTGTGTGGGTTTGAAGAGTAGTGTTAATGGTAATAACAACATACTGAGTGTAGTCCTACAAGTGGGGGTCTCGGGAGGGTAGTGTATATGCAACTTTACGCCCCCTCCCCCCCAACCTTGCGAAGGTAGGGACTAGGAAAGCGGGTTCCGAAGGACCATTGGCTCAAGTAAACGTATGTAAGGGTAGTATTAAGTATTAAGTAGTTATATTTATGTGTTTGGGATTTAGGCAAGTGAGAATTGCTTGTTTATGGTTTGTGGCTTGAGTTTTAGTGTTTTTGTTGATTAATTGCATATTCTTAGTGGAACTTGCTGTAACACTGCTTGAGCTTGCATCTCTTGATTGGTTGCTTATTTAAGAGTGGTATTAACAGTAACAACAACATACTGATTGTAATCCCGCAAGTGGGGTCTATAGAGGGTAGTGTGTATGCAGCCTTAATCCCCTACCTTGTGAAGGTAGAGAGGCAGTTTCTGAAGGATCCTTGGCTCAACTAACCACATATAAGAGTAGTATTAAGTGGTTGTTTTTTGTGTGTTTGGGATTTAGATGAGTGAGAAGTGCTTGTGGGTTTGTTGGTTTAATCTTATTTTTGGTAAGGTTCTTCAAATGATGTTGTGTTTATTGGTATTTTCTAAGAGTGTCTAGATGTGCTGTTGTTGCTTGATTGGGATTTCTTGTCTTTGGGTGTGGTATCTGTGTTCCTAATTGAAATTCGAGGGACATGGAGTGCTTACTGCAACCAATTATATATAAAAAAAAAAGAAGAATATTTTTCCGTGTTTGGTTCATGAAAAAGAATATCGTGAGAGCATTTTGAAGACGTAATGAAGTAAATCAAAGTGTGTTGCCCCAATGGACTTTTAGATGAGATGATCATACAATTCAACATTTGTGCAGGCTATGTGTGCTCCTAGTTGTTTAGATGCTATTGTGATGTCAATCTGAAAGCTAATTATAGAAATTGTAGTATCCAAATTTGTTGTTTTAAAATTATTTGAACTTATTCAGTTCCCGCACGAGTACATTGGCAGGTATGTTTTTTCTAATATGAAAAATAATTGACCAAAGTAACTCAATATTTCCTCATAATTTTTGAAATCCTTAGCTATTTTATTGTTTGACTGGTTTCTAGCTTTTTTTCTTTTGGGTGTAACCATCTGATATCTGATACTCATACCACGACTAGTTTAGATTCGTGTTGCATAGGACCATTAAATGGGGAAACACTCACATCCACTTAGTTAAAGGTATGGTATCCCATCCACTTCACCGCACCTTTGATGTTAGACTTTTTACTGTGATTTCATAGCTTTTGTTTTACCAATCTAGGAAATCAAAGAAGACAACTTGGTGTTATATGTGAAAAAGGAATTGATAATTTTTTACAGGCATGGTTGATGTGTAGACTAGAATGGAATGTTTTTCGCTAGCAAATGCTTCCTCTGAATAGGAAATAGTTTTACTGAACTGACCAATGTAAAATATACTCCATTTCTAGATGAGACCATTACTCTTTGCGGAATAAGATAGTTTTTCTGTTTGGTTGTAATTCTTGCAGATACTTGTAAAAAATATGAATTAATTGTATTTTCTTATGTAGTTTCTACATTTATAGCATATGATTTTGATTAGTTTTTTTTTATGTCATTGAATTTTGGTTTTGTAGTAGATGCTATACTTAAAGAACATACTTCCTTGTTTAATGTATGAAAATTGGAAGGAATATCCTTAGTCAACAGTCTGTCCTACACTTGATATTGTTATTCTACCGGATAGTATGAGTTTCTCCTTTTTGATTTCATTGAGTAGATTTGTGATGATTATAAGACATATAAAACATGTTAATAAAAAGGAGTAGAGAAGTATATGCGAAAATTCAAACTACAAACTTAGTTCCAAACTAAACTGTCATTTTGAAATATAGATGTTTTACATGGATTCTTCATTAATCATTATCATCAATATACGTGTTTGAGTGATTGTGATGTGGGCATGGTTACTTCATGTAGATACACTCAAAATTAGCGAAAAGTCTATAAGTACACATACTAGATACGTATGCACATCATAGGAATAATAAATCTTTGGATTAGTTAGGCATAAACTAAACCAAGATGCCCCCAAGGCCTAGCTCGAGTGGCAAAAGGTGGAGGATTTGTGACTTAGGTCGCAGGTTCAAGCCCACACCATGCAAAGCGAAGCCTGGTATTTAAGTGGGGAAGGGTAGAGGGGTGGACCCATTATCCACCGAGTTTAGAAGGTTGTGATTGGTCCAAAGGGCAGTGGGTCACGGATAAATAAATAATTGGAAGTCATATTTGTATGTGATACAACTTAAAGTACTGACAAAAAGAATTGAGATACAACTTAAGGTAACATTCGAACTTCTGTAGGATTTTTTAGTAAAGGTGGTTTTCAGGCCATTTTGAGCCACCTGTTACGTTCTAAATCCACCAGTATAGTTATCCGGTAACTGTCTATCAAAGCTTAGACAAATGGGAAGATGTCACCCTACATTTTTTGCCTATGCTAGGACTTGATCCCAGAAATCCCATGGTTTTAATCTATTTCATTGACACTACCCTGGCTTTTTATAACTTCTATTGTAGTATGTTAAGAGGAGTATAGTAGATATTTGGTATGGGCAAAAAAGAATCTCAGATTAATTATTTCTCCAAAAAGTAGTGAACGTGAAAGAATTTGGTGAACCAAAAAAAGTGAGGATTTCAGTGTAGGGAGAAATTTGGGGAACTAAAAGAACTGACGATATGGGTTACATTATTGGTTACTAGGCTTATGAATCATAAGTGTCGATCAAATGCCACGAGCAATGGCATCGTGTCACGGTTGTCCTTGAAATGTTCTATACTCATGTTACTTGCAACAAATAATAATTTTTGGGTGGAAACACAGTGCAGTTTTAATGATGGGGTGATTGAAACATGTGTAGCTGGCATGATAAAAACGTGAGGATTGAATAAAGAGGAACATAACAGCTGTCCCTGCTTGAACACCCTTGCATATCTTTCTGATATGATGCTCAAGTTTGTAAGTGGCCTTTATCCTATTCATTTCTTGAGAATATGTGAAGCTATGCGTATTGGTTCTGCCAGTGTTTCTGTTGGCACAGTTCAGCCTCTGGTTCACCACCTTTTAGTTTGTAAATAACATCTTGTACGCTTCTCAATGTCAAGGACGTGATCCACTCTGGACGAAATATTAATCTTCCTTCTTATTACAAATCCATCATTCTGTTGTATCTCCTATTGTTGTTTGCATGCAAAACCCTTTTCTGAGATGAATTACATTGGCAAATAAGAGGTAATCGCTGAGCATTCTCATCTCTTGTGAGGAGAAAAAAATTATTTTCTTCTCTAACTATTCCACTCAAGGTGCTTTTTTATGTCTACTATATTTATCCACAGTAACCCAGTTTCCTACTTAGAGCTTAAAGATAGCAACAAAAGAAAGATGGAGTAGCCCTCATCCTTCTGGGCATTTTTTTGGTCTTATGGTTTCTTGTCCTATTGTTTTTTTCCAATTCTCCTATAGGCCCTGCTATGCGTGACTCCAGATTTGTTGGGCTCCAATGCGGGTATCAAAACACTGGGCAGGAAACCAAAGAAAATAGAATTAAAGAAAGTTAACTTTGTGAATAAATTGGGTCACGTATTACTGGTAAACTACAGTGTTCATTATTTTTCTTAAATCAGTAAATTTAATATTCATTATATTCAAACTCAGTTGCATCTACAGATTTTTCGTTTACTACTAGTTTTTGTTTGTTTTCTTCCCTCTTGGTGTTGCCTCCCTCCCTCCTCCCCCAACATTATTGACGATCTGTGCTGATGGAGAATGGTGTTATATGCAACTTATTGTTACTGTTGTATAGAAAGGGAATGTATTGGGATGCATCCTTGTTCCTTTAAGTTGTTGTACTATTGCTTCAGTTTTTCTTCTTCATACCAGGTATCGTGCCATTACGAGTGCTTATTATCGGGGAGCTGTCGGTGCTTTGCTCGTATATGATGTTACTCGACATGTTACCTTTGAAAACGTCAACAGGTGGTTGAAGGAATTGAGAGACCATACTGACCCTAACATTGTAGTCATGCTCCTAGGCAACAAATCAGATCTCCGACATCTCGTGGCTGTTTCAACTGAAGAGGCTAAATCTTTGGCAGAGAGGGAAGCCCTATACTTCATGGAAACTTCTGCATTAGAAGCGACCAACGTTGAAAATGCGTTTACTGAAGCTCTCACGCAGATATACCGGATCGTCAGTAAGAAAGCAGTCGAGGCAGGGGACGAAGGTGCTACTTCAACCGCACCACCTAAAGGACAGACGATTAATATCAAAGATGAAGGATCTGCTTGGAAAAAGTTTGGGTGCTGTTCGAGCTAGGGCTCACGTAAGACAATAGCTCAAGCTTTATATATCAGTTGTAAATTGTCATTAAATCAATGATTTCCTCTCCCTGTTTTCTCTCACTTTGGGTATCGCGATTGTGGGATATAAGATTTATTCTATAGTCATGAGAATACGTGAAGCAGCGCGTTCTCATGAAAAATTCCGAAGGAGGATCAGGTACTGCTAGTTTCTAATTACAGAATGTCTAAACAAGGTCTTAGTTTTATGTTTTCTGGTTGATGGCTTGAAAAACTGGAGATATCTTTGCAATAACCTGTTACCGAATATCTTCTTATTTGTCTCGAATTTACGTCTTAAT
GAGTCCTCACCCCATTTCTCCGCCTTCAAGAATTTATTTTTTTCTTCTTCAAAATTGAATCTTTTCAGTGAACTTTTACTATTTGGTCAATCAAGAAGTGAAATTACAGAGCAAAAGCAGATATAGTTTTGAAGATGGCAGGTTACAGAGGTGATGATGAGTATGATTACCTTTTCAAGCTTGTGTTGATAGGTGATTCAGGTGTGGGTAAATCTAATCTGCTTTCCAGGTTCACCAAAAATGAATTCAATTTGGAGTCTAAATCAACTATTGGGGTTGAATTTGCAACCAAAAGTCTTAATATTGATGGTAAAGTTATTAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTAAAGGTTAAATCTTTGAACTTTTTTTTGTTTTGTATTGGTGATATTCACTCAGTATGTTAGTTTTTGTGTTTCTATATCTGGGGTTTTCTTGTTTTTGGTTTATGGCTTGAGTTTTAGTGTTTTTTGTTGATTGGTTGCATAGTTTTGGTGTAACAGTCTTTTTACTAGTGATTGAGTCTGCATCTGTTTATTTTGAAGTTGTGTGGGTTTGAAGAGTAGTGTTAATGGTAATAACAACATACTGAGTGTAGTCCTACAAGTGGGGGTCTCGGGAGGGTAGTGTATATGCAACTTTACGCCCCCTCCCCCCCAACCTTGCGAAGGTAGGGACTAGGAAAGCGGGTTCCGAAGGACCATTGGCTCAAGTAAACGTATGTAAGGGTAGTATTAAGTATTAAGTAGTTATATTTATGTGTTTGGGATTTAGGCAAGTGAGAATTGCTTGTTTATGGTTTGTGGCTTGAGTTTTAGTGTTTTTGTTGATTAATTGCATATTCTTAGTGGAACTTGCTGTAACACTGCTTGAGCTTGCATCTCTTGATTGGTTGCTTATTTAAGAGTGGTATTAACAGTAACAACAACATACTGATTGTAATCCCGCAAGTGGGGTCTATAGAGGGTAGTGTGTATGCAGCCTTAATCCCCTACCTTGTGAAGGTAGAGAGGCAGTTTCTGAAGGATCCTTGGCTCAACTAACCACATATAAGAGTAGTATTAAGTGGTTGTTTTTTGTGTGTTTGGGATTTAGATGAGTGAGAAGTGCTTGTGGGTTTGTTGGTTTAATCTTATTTTTGGTAAGGTTCTTCAAATGATGTTGTGTTTATTGGTATTTTCTAAGAGTGTCTAGATGTGCTGTTGTTGCTTGATTGGGATTTCTTGTCTTTGGGTGTGGTATCTGTGTTCCTAATTGAAATTCGAGGGACATGGAGTGCTTACTGCAACCAATTATATATAAAAAAAAAAGAAGAATATTTTTCCGTGTTTGGTTCATGAAAAAGAATATCGTGAGAGCATTTTGAAGACGTAATGAAGTAAATCAAAGTGTGTTGCCCCAATGGACTTTTAGATGAGATGATCATACAATTCAACATTTGTGCAGGCTATGTGTGCTCCTAGTTGTTTAGATGCTATTGTGATGTCAATCTGAAAGCTAATTATAGAAATTGTAGTATCCAAATTTGTTGTTTTAAAATTATTTGAACTTATTCAGTTCCCGCACGAGTACATTGGCAGGTATGTTTTTTCTAATATGAAAAATAATTGACCAAAGTAACTCAATATTTCCTCATAATTTTTGAAATCCTTAGCTATTTTATTGTTTGACTGGTTTCTAGCTTTTTTTCTTTTGGGTGTAACCATCTGATATCTGATACTCATACCACGACTAGTTTAGATTCGTGTTGCATAGGACCATTAAATGGGGAAACACTCACATCCACTTAGTTAAAGGTATGGTATCCCATCCACTTCACCGCACCTTTGATGTTAGACTTTTTACTGTGATTTCATAGCTTTTGTTTTACCAATCTAGGAAATCAAAGAAGACAACTTGGTGTTATATGTGAAAAAGGAATTGATAATTTTTTACAGGCATGGTTGATGTGTAGACTAGAATGGAATGTTTTTCGCTAGCAAATGCTTCCTCTGAATAGGAAATAGTTTTACTGAACTGACCAATGTAAAATATACTCCATTTCTAGATGAGACCATTACTCTTTGCGGAATAAGATAGTTTTTCTGTTTGGTTGTAATTCTTGCAGATACTTGTAAAAAATATGAATTAATTGTATTTTCTTATGTAGTTTCTACATTTATAGCATATGATTTTGATTAGTTTTTTTTTATGTCATTGAATTTTGGTTTTGTAGTAGATGCTATACTTAAAGAACATACTTCCTTGTTTAATGTATGAAAATTGGAAGGAATATCCTTAGTCAACAGTCTGTCCTACACTTGATATTGTTATTCTACCGGATAGTATGAGTTTCTCCTTTTTGATTTCATTGAGTAGATTTGTGATGATTATAAGACATATAAAACATGTTAATAAAAAGGAGTAGAGAAGTATATGCGAAAATTCAAACTACAAACTTAGTTCCAAACTAAACTGTCATTTTGAAATATAGATGTTTTACATGGATTCTTCATTAATCATTATCATCAATATACGTGTTTGAGTGATTGTGATGTGGGCATGGTTACTTCATGTAGATACACTCAAAATTAGCGAAAAGTCTATAAGTACACATACTAGATACGTATGCACATCATAGGAATAATAAATCTTTGGATTAGTTAGGCATAAACTAAACCAAGATGCCCCCAAGGCCTAGCTCGAGTGGCAAAAGGTGGAGGATTTGTGACTTAGGTCGCAGGTTCAAGCCCACACCATGCAAAGCGAAGCCTGGTATTTAAGTGGGGAAGGGTAGAGGGGTGGACCCATTATCCACCGAGTTTAGAAGGTTGTGATTGGTCCAAAGGGCAGTGGGTCACGGATAAATAAATAATTGGAAGTCATATTTGTATGTGATACAACTTAAAGTACTGACAAAAAGAATTGAGATACAACTTAAGGTAACATTCGAACTTCTGTAGGATTTTTTAGTAAAGGTGGTTTTCAGGCCATTTTGAGCCACCTGTTACGTTCTAAATCCACCAGTATAGTTATCCGGTAACTGTCTATCAAAGCTTAGACAAATGGGAAGATGTCACCCTACATTTTTTGCCTATGCTAGGACTTGATCCCAGAAATCCCATGGTTTTAATCTATTTCATTGACACTACCCTGGCTTTTTATAACTTCTATTGTAGTATGTTAAGAGGAGTATAGTAGATATTTGGTATGGGCAAAAAAGAATCTCAGATTAATTATTTCTCCAAAAAGTAGTGAACGTGAAAGAATTTGGTGAACCAAAAAAAGTGAGGATTTCAGTGTAGGGAGAAATTTGGGGAACTAAAAGAACTGACGATATGGGTTACATTATTGGTTACTAGGCTTATGAATCATAAGTGTCGATCAAATGCCACGAGCAATGGCATCGTGTCACGGTTGTCCTTGAAATGTTCTATACTCATGTTACTTGCAACAAATAATAATTTTTGGGTGGAAACACAGTGCAGTTTTAATGATGGGGTGATTGAAACATGTGTAGCTGGCATGATAAAAACGTGAGGATTGAATAAAGAGGAACATAACAGCTGTCCCTGCTTGAACACCCTTGCATATCTTTCTGATATGATGCTCAAGTTTGTAAGTGGCCTTTATCCTATTCATTTCTTGAGAATATGTGAAGCTATGCGTATTGGTTCTGCCAGTGTTTCTGTTGGCACAGTTCAGCCTCTGGTTCACCACCTTTTAGTTTGTAAATAACATCTTGTACGCTTCTCAATGTCAAGGACGTGATCCACTCTGGACGAAATATTAATCTTCCTTCTTATTACAAATCCATCATTCTGTTGTATCTCCTATTGTTGTTTGCATGCAAAACCCTTTTCTGAGATGAATTACATTGGCAAATAAGAGGTAATCGCTGAGCATTCTCATCTCTTGTGAGGAGAAAAAAATTATTTTCTTCTCTAACTATTCCACTCAAGGTGCTTTTTTATGTCTACTATATTTATCCACAGTAACCCAGTTTCCTACTTAGAGCTTAAAGATAGCAACAAAAGAAAGATGGAGTAGCCCTCATCCTTCTGGGCATTTTTTTGGTCTTATGGTTTCTTGTCCTATTGTTTTTTTCCAATTCTCCTATAGGCCCTGCTATGCGTGACTCCAGATTTGTTGGGCTCCAATGCGGGTATCAAAACACTGGGCAGGAAACCAAAGAAAATAGAATTAAAGAAAGTTAACTTTGTGAATAAATTGGGTCACGTATTACTGGTAAACTACAGTGTTCATTATTTTTCTTAAATCAGTAAATTTAATATTCATTATATTCAAACTCAGTTGCATCTACAGATTTTTCGTTTACTACTAGTTTTTGTTTGTTTTCTTCCCTCTTGGTGTTGCCTCCCTCCCTCCTCCCCCAACATTATTGACGATCTGTGCTGATGGAGAATGGTGTTATATGCAACTTATTGTTACTGTTGTATAGAAAGGGAATGTATTGGGATGCATCCTTGTTCCTTTAAGTTGTTGTACTATTGCTTCAGTTTTTCTTCTTCATACCAGGTATCGTGCCATTACGAGTGCTTATTATCGGGGAGCTGTCGGTGCTTTGCTCGTATATGATGTTACTCGACATGTTACCTTTGAAAACGTCAACAGGTGGTTGAAGGAATTGAGAGACCATACTGACCCTAACATTGTAGTCATGCTCCTAGGCAACAAATCAGATCTCCGACATCTCGTGGCTGTTTCAACTGAAGAGGCTAAATCTTTGGCAGAGAGGGAAGCCCTATACTTCATGGAAACTTCTGCATTAGAAGCGACCAACGTTGAAAATGCGTTTACTGAAGCTCTCACGCAGATATACCGGATCGTCAGTAAGAAAGCAGTCGAGGCAGGGGACGAAGGTGCTACTTCAACCGCACCACCTAAAGGACAGACGATTAATATCAAAGATGAAGGATCTGCTTGGAAAAAGTTTGGGTGCTGTTCGAGCTAGGGCTCACGTAAGACAATAGCTCAAGCTTTATATATCAGTTGTAAATTGTCATTAAATCAATGATTTCCTCTCCCTGTTTTCTCTCACTTTGGGTATCGCGATTGTGGGATATAAGATTTATTCTATAGTCATGAGAATACGTGAAGCAGCGCGTTCTCATGAAAAATTCCGAAGGAGGATCAGGTACTGCTAGTTTCTAATTACAGAATGTCTAAACAAGGTCTTAGTTTTATGTTTTCTGGTTGATGGCTTGAAAAACTGGAGATATCTTTGCAATAACCTGTTACCGAATATCTTCTTATTTGTCTCGAATTTACGTCTTAAT
Download sequence region |
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc07g055290.2.1 Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN); contains Interpro domain(s) IPR015595 Rab11-related
GAGTCCTCACCCCATTTCTCCGCCTTCAAGAATTTATTTTTTTCTTCTTCAAAATTGAATCTTTTCAGTGAACTTTTACTATTTGGTCAATCAAGAAGTGAAATTACAGAGCAAAAGCAGATATAGTTTTGAAGATGGCAGGTTACAGAGGTGATGATGAGTATGATTACCTTTTCAAGCTTGTGTTGATAGGTGATTCAGGTGTGGGTAAATCTAATCTGCTTTCCAGGTTCACCAAAAATGAATTCAATTTGGAGTCTAAATCAACTATTGGGGTTGAATTTGCAACCAAAAGTCTTAATATTGATGGTAAAGTTATTAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTATCGTGCCATTACGAGTGCTTATTATCGGGGAGCTGTCGGTGCTTTGCTCGTATATGATGTTACTCGACATGTTACCTTTGAAAACGTCAACAGGTGGTTGAAGGAATTGAGAGACCATACTGACCCTAACATTGTAGTCATGCTCCTAGGCAACAAATCAGATCTCCGACATCTCGTGGCTGTTTCAACTGAAGAGGCTAAATCTTTGGCAGAGAGGGAAGCCCTATACTTCATGGAAACTTCTGCATTAGAAGCGACCAACGTTGAAAATGCGTTTACTGAAGCTCTCACGCAGATATACCGGATCGTCAGTAAGAAAGCAGTCGAGGCAGGGGACGAAGGTGCTACTTCAACCGCACCACCTAAAGGACAGACGATTAATATCAAAGATGAAGGATCTGCTTGGAAAAAGTTTGGGTGCTGTTCGAGCTAGGGCTCACGTAAGACAATAGCTCAAGCTTTATATATCAGTTGTAAATTGTCATTAAATCAATGATTTCCTCTCCCTGTTTTCTCTCACTTTGGGTATCGCGATTGTGGGATATAAGATTTATTCTATAGTCATGAGAATACGTGAAGCAGCGCGTTCTCATGAAAAATTCCGAAGGAGGATCAGGTACTGCTAGTTTCTAATTACAGAATGTCTAAACAAGGTCTTAGTTTTATGTTTTCTGGTTGATGGCTTGAAAAACTGGAGATATCTTTGCAATAACCTGTTACCGAATATCTTCTTATTTGTCTCGAATTTACGTCTTAAT
GAGTCCTCACCCCATTTCTCCGCCTTCAAGAATTTATTTTTTTCTTCTTCAAAATTGAATCTTTTCAGTGAACTTTTACTATTTGGTCAATCAAGAAGTGAAATTACAGAGCAAAAGCAGATATAGTTTTGAAGATGGCAGGTTACAGAGGTGATGATGAGTATGATTACCTTTTCAAGCTTGTGTTGATAGGTGATTCAGGTGTGGGTAAATCTAATCTGCTTTCCAGGTTCACCAAAAATGAATTCAATTTGGAGTCTAAATCAACTATTGGGGTTGAATTTGCAACCAAAAGTCTTAATATTGATGGTAAAGTTATTAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTATCGTGCCATTACGAGTGCTTATTATCGGGGAGCTGTCGGTGCTTTGCTCGTATATGATGTTACTCGACATGTTACCTTTGAAAACGTCAACAGGTGGTTGAAGGAATTGAGAGACCATACTGACCCTAACATTGTAGTCATGCTCCTAGGCAACAAATCAGATCTCCGACATCTCGTGGCTGTTTCAACTGAAGAGGCTAAATCTTTGGCAGAGAGGGAAGCCCTATACTTCATGGAAACTTCTGCATTAGAAGCGACCAACGTTGAAAATGCGTTTACTGAAGCTCTCACGCAGATATACCGGATCGTCAGTAAGAAAGCAGTCGAGGCAGGGGACGAAGGTGCTACTTCAACCGCACCACCTAAAGGACAGACGATTAATATCAAAGATGAAGGATCTGCTTGGAAAAAGTTTGGGTGCTGTTCGAGCTAGGGCTCACGTAAGACAATAGCTCAAGCTTTATATATCAGTTGTAAATTGTCATTAAATCAATGATTTCCTCTCCCTGTTTTCTCTCACTTTGGGTATCGCGATTGTGGGATATAAGATTTATTCTATAGTCATGAGAATACGTGAAGCAGCGCGTTCTCATGAAAAATTCCGAAGGAGGATCAGGTACTGCTAGTTTCTAATTACAGAATGTCTAAACAAGGTCTTAGTTTTATGTTTTCTGGTTGATGGCTTGAAAAACTGGAGATATCTTTGCAATAACCTGTTACCGAATATCTTCTTATTTGTCTCGAATTTACGTCTTAAT
![]() ![]() | translated polypeptide sequence |
>Solyc07g055290.2.1 Ras-related protein Rab-25 (AHRD V1 ***- RAB25_BOVIN); contains Interpro domain(s) IPR015595 Rab11-related
MAGYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSTAPPKGQTINIKDEGSAWKKFGCCSS*
MAGYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSTAPPKGQTINIKDEGSAWKKFGCCSS*
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![]() ![]() | [Associate new unigene] |
Unigene ID:
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![]() ![]() | [Associate new genbank sequence] |
AJ245570 Lycopersicon esculentum mRNA for Rab11 GTPase (Rab11a gene).
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Developmental abnormalities and reduced fruit softening in tomato plants expressing an antisense Rab11 GTPase gene.
The Plant cell (2001)
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A cDNA clone from tomato fruit encodes a protein with strong homology with the rab11/YPT3 class of small GTPases that is thought to be involved in the control of protein trafficking within cells. The gene, LeRab11a, showed a pattern consistent with a single copy in DNA gel blots. The corresponding mRNA was developmentally regulated during fruit ripening, and its expression was inhibited in several ripening mutants. Its reduced expression in the Never-ripe mutant indicates that it may be induced by ethylene in fruit. The ripening-induced expression in tissues that are undergoing cell wall loosening immediately suggests a possible role in trafficking of cell wall-modifying enzymes. The message also was produced in leaves and flowers but not in roots. Antisense transformation was used to generate a "mutant phenotype." Antisense fruit changed color as expected but failed to soften normally. This was accompanied by reduced levels of two cell wall hydrolases, pectinesterase and polygalacturonase. There were other phenotypic effects in the plants, including determinate growth, reduced apical dominance, branched inflorescences, abnormal floral structure, and ectopic shoots on the leaves. In some plants, ethylene production was reduced. These data suggest an alternative or additional role in exocytosis or endocytosis of homeotic proteins, hormone carriers, or receptors.
Lu, C. Zainal, Z. Tucker, GA. Lycett, GW.
The Plant cell.
2001.
13(8).
1819-33.
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