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Tomato locus APETALA2b
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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APETALA2b is on PhyloGenes
TomDelDB genotype frequencies in tomato populations. chromosome SL2.50ch02, position: 36075386
Please cite Razifard et al.
| Registry name: | None | [Associate registry name] |
Notes and figures (0)
Notes and figures (0)
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Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
Accession name:
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| Alleles (0) | None | [Add new Allele] |
Associated loci (4)
Associated loci (4)
| [Associate new locus] |
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Associated loci - graphical view
Associated loci - graphical view
| View APETALA2b relationships in the stand-alone network browser |
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SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>Solyc02g064960.2 SL2.50ch02:36073711..36077281
AGTGAGAAGTAAAAAGGAATGGAAAACACACACACTCTCTCTCTAACCTTTTCTTGTAACAACTTAATCTCTCTCTGTAAGTCATCTGTTTTCTTGTTCTTATATTTTCTTTCAACACTCACGGAAAATCTCCATTTCATTATTATAGTTCAGATTCAACTCAACATGTGTATTTAGTAGAGAGAAAAAAAGTAGAGAATATTTATAGGTGAGGGTCAAATTTTAGCTGAGATGAAAGAGCTAAGCAAACAAAACTCTTGAAATTGTTTCTCCGATCCTCTTTTGTTTACTATTGTTTGACTTGTAGAGAAAGAAATGTGGAATCTAAACAACTCTCCAGATCATATAAAGGACTATGAATCAGAAGAAGGTAAAGGTGTTGGATCCATTTCAAATTCAAGTTCATCAGCTGTTGAGGAATTATACGGTTCAGAGGAAGAAGATGAATTTCTCGAACAAAATGGACTAAAAGGCAAGAAAAAGAAAAATATTCCTAGTAAAATATTTGGCTTCTCTATGATTGCTCCACCTAATAATAACAATCACAACGACGATAACTTGTCGTCGGAGAGTGAACCGCCGGTTACCCGGCAGTTTTTTCCGGTTGATGAGTCGGAAATCGGAAGTGGCAATTTTAATGATAGATCTTGTAGATTTCCAAGGGCCCATTGGGCTGGAGTGAAATTCTACCAACCGGAGCCATCTGCTAATTCGCCAGCACTATTGGGGAAGGGTAGTGAGTTGTCGCAACAAGTGCAGCCAATGAAAAAAAGCCGGCGTGGTCCAAGGTCTAGAAGCTCACAGTACCGCGGTGTTACTTTTTATCGGAGAACTGGCCGCTGGGAATCACATATATGGTCAGTTTCTATTAATTGATTAATGGTTCGTTTTCTTTTCTTCCTTTTAAAACTCATTCATTTGGTTTTTACGATCGCTCAGGGATTGTGGAAAGCAAGTTTATCTAGGTACGGTTTTTTAAAATTTATTTCCGAGCTGAAGTTGCAAAAAGTTTAGTATGTTGATTTTCGCAGATTTTATAATTTGTAGGTGGATTTGATACTGCACATGCTGCTGCTCGGTGAGCTCTTTAGCATTGTTAGTTTTTTCGTAAACAATTAAAAATAAAACACATGTATATTGAAAGATTGAAAAATGTGTTTTCTCAGTGCGTACGATCGGGCAGCAATAAAATTTCGTGGAATGGAGGCGGACATAAACTTTAACCTCGAAGATTATGAGGAAGATTTAAAACAGGTAGGTTCATGATATTTTTTATTTGCTTTTCTAGCTGGAGTACAACTACTTTAGTGAATTACACTCTCTCCCTTGTCTTTTTTAAAAAAGAATAATGATTCCTTTTTATCTTCAACAGTTGTTTACTCTATACCCTGAGTGTTCGGAATTTAAATTTAATGAGTTAGATTTTTAGATTCTAACAACTCATTTATACATTCGAAATTGTAAACGATTCTATGGTCCATTTTCCTAAGCCATATCCAATGGAGAGACATTTTTTTGACATGAAACATTTTGAATTTACTTCTTCCTTGTGTTGTAATATTGGTTTTGGTTTGTTGTATATGTATGATGTAGATGAAGAATTTAACGAAGGAAGAATTTGTTCATGTACTGAGGAGGCAAAGTACTGGTTTTCCGAGGGGAAGTTCTAAGTATAGAGGGGTGACATTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGTCAATTGTTGGGCAAAAAGTATAATATTTTATCCTCAATTTATTTTGTTGCCAAATGTCATTAAGCTTGGTAGGCTATTAATTTCTAAGAAAAAATATTTTTGAATAGGTACGTTTATTTGGGACTCTTTGATACTGAAAATGAAGCTGCCAGGTTTGTGTGGTGTTGAATTTATTTTGTATTTTTTTTGCACTACAATTGCTGAAAAATCGTCTTTTTTATTCTTTTTATAGGGCTTATGATAAAGCTGCCATCAAATGTAATGGCAAGGATGCAGTCACTAACTTCGATCCTTGCATTTATGAAAATGAACTTAATTCATCTGGTACAGTTGTGTATTTGTTCCTTCTTTTTTTTTTAAGAAGAGAGTTTTCTGACAAACATTTTTAATTGTGGTTTCTCAGAATGTAGTAATAAAGCAGCAGATCACAGCCTTGACTTAAGCTTAGGTAGTTCGAGCTCAAAGCAAAACAGCCGTGAAATGGAGGATACTAATAAGAATCAAAATTATCCTTCTATCCAATTTGATGTTGATTGGCGACACCAAGGGTCGAAACCCAAGGTACGTAGAATTTTTCTATACTCAGAATTCAAATGAAATATCTGGTGAAATTAAGGATTTTATCTCTACATTTTCTATGTATACAAGTTAAACTTACCTTTTGTAGCTTAATATCTTCGGAGCGTGATTGTAGTTTCTTACTCCTTACAATATTACATGCATGATGAAATGTTTCGATTATTCGCAGCAACCTAGTCCACTTGATATGGAGTATGGGCGAAGAAGAAATGTGTACAATGAGACGGAAACGTTGCAACTCTTTAGCCAAACGCACCTACATTCTCCGGGATCCTTCAAGACAAATAGCAATGAAATGCAAAGGTTTGGCCAATATATGAGAGCTGGTGACTCCCAAATGATTCCACCACAATTCACCTCCTCAAATTATCAAGTGAGTAACCAATTTTACATGACTTTAACTTGTTAATTTTTTTGTTTACTCAATCAAATCATTTAGTTTGTAGCTATTTCTCCCATGATTTTTTTTAAAAAAAATCCACCACTTATTTTTGCTTTTTTGGTAGTGATACAAGTATATGTCTGTAATACGTGGAACTACTCTGAAAAAATAATACAAGATTACCTCCTTTGAAAGAGTTATATCACGTTGATAATATAATAGTAGTTACGTTGGTGGAGTATTCTAGTAAAAGATCCTGGAGTAAATATGTCCAGTATTTAATTGTTGAGTATTCGCCAAAACCAAAATAATTTTTTAGAAGGTTAATCTAGTTTGGTGGTTATTAATCCTACGATAACCTTATGTAGCTAGAAATATATTTATAATTGTTAAGAATTATGATGATACAGGTTCAGTTTCCAAGCAGCAGCAATAGAAGAGATACTCAACAATGGCAAAGCAATACTGTTCCTCCTCCTCACCTATTTGCAACTGCTGCAGCATCATCAGGATTCCCTCAGCAGATATTAAGACATCAAAACTGGCCTCACAAAAGTGGCTTTAACTACTCTCTCACCAGACCATCCAATTAATTTTCTATCGAGACAGTCGATCGATGCATGGAATATTTTGCGTCTAAGAGAGTTAGCGAACCGCACGCACCTGAAGGAGGGTTGTGATGTAAACTATAATGTAATATAATATTTACAAGGGTTAATCTTGATGGTAAAAAAAAGCTTTTGAGAGATTCCAACTCTATGGATATAGTTGGTACAAAGCTAACTGAAGAAGAGATATTGAACTAGATTTCTTACTCATGTAAGCTGCCAATTTATACCATCCACAAGTACAGCTACTAAATAAATGTTTTTAATTTTTTGGTGGTCT
AGTGAGAAGTAAAAAGGAATGGAAAACACACACACTCTCTCTCTAACCTTTTCTTGTAACAACTTAATCTCTCTCTGTAAGTCATCTGTTTTCTTGTTCTTATATTTTCTTTCAACACTCACGGAAAATCTCCATTTCATTATTATAGTTCAGATTCAACTCAACATGTGTATTTAGTAGAGAGAAAAAAAGTAGAGAATATTTATAGGTGAGGGTCAAATTTTAGCTGAGATGAAAGAGCTAAGCAAACAAAACTCTTGAAATTGTTTCTCCGATCCTCTTTTGTTTACTATTGTTTGACTTGTAGAGAAAGAAATGTGGAATCTAAACAACTCTCCAGATCATATAAAGGACTATGAATCAGAAGAAGGTAAAGGTGTTGGATCCATTTCAAATTCAAGTTCATCAGCTGTTGAGGAATTATACGGTTCAGAGGAAGAAGATGAATTTCTCGAACAAAATGGACTAAAAGGCAAGAAAAAGAAAAATATTCCTAGTAAAATATTTGGCTTCTCTATGATTGCTCCACCTAATAATAACAATCACAACGACGATAACTTGTCGTCGGAGAGTGAACCGCCGGTTACCCGGCAGTTTTTTCCGGTTGATGAGTCGGAAATCGGAAGTGGCAATTTTAATGATAGATCTTGTAGATTTCCAAGGGCCCATTGGGCTGGAGTGAAATTCTACCAACCGGAGCCATCTGCTAATTCGCCAGCACTATTGGGGAAGGGTAGTGAGTTGTCGCAACAAGTGCAGCCAATGAAAAAAAGCCGGCGTGGTCCAAGGTCTAGAAGCTCACAGTACCGCGGTGTTACTTTTTATCGGAGAACTGGCCGCTGGGAATCACATATATGGTCAGTTTCTATTAATTGATTAATGGTTCGTTTTCTTTTCTTCCTTTTAAAACTCATTCATTTGGTTTTTACGATCGCTCAGGGATTGTGGAAAGCAAGTTTATCTAGGTACGGTTTTTTAAAATTTATTTCCGAGCTGAAGTTGCAAAAAGTTTAGTATGTTGATTTTCGCAGATTTTATAATTTGTAGGTGGATTTGATACTGCACATGCTGCTGCTCGGTGAGCTCTTTAGCATTGTTAGTTTTTTCGTAAACAATTAAAAATAAAACACATGTATATTGAAAGATTGAAAAATGTGTTTTCTCAGTGCGTACGATCGGGCAGCAATAAAATTTCGTGGAATGGAGGCGGACATAAACTTTAACCTCGAAGATTATGAGGAAGATTTAAAACAGGTAGGTTCATGATATTTTTTATTTGCTTTTCTAGCTGGAGTACAACTACTTTAGTGAATTACACTCTCTCCCTTGTCTTTTTTAAAAAAGAATAATGATTCCTTTTTATCTTCAACAGTTGTTTACTCTATACCCTGAGTGTTCGGAATTTAAATTTAATGAGTTAGATTTTTAGATTCTAACAACTCATTTATACATTCGAAATTGTAAACGATTCTATGGTCCATTTTCCTAAGCCATATCCAATGGAGAGACATTTTTTTGACATGAAACATTTTGAATTTACTTCTTCCTTGTGTTGTAATATTGGTTTTGGTTTGTTGTATATGTATGATGTAGATGAAGAATTTAACGAAGGAAGAATTTGTTCATGTACTGAGGAGGCAAAGTACTGGTTTTCCGAGGGGAAGTTCTAAGTATAGAGGGGTGACATTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGTCAATTGTTGGGCAAAAAGTATAATATTTTATCCTCAATTTATTTTGTTGCCAAATGTCATTAAGCTTGGTAGGCTATTAATTTCTAAGAAAAAATATTTTTGAATAGGTACGTTTATTTGGGACTCTTTGATACTGAAAATGAAGCTGCCAGGTTTGTGTGGTGTTGAATTTATTTTGTATTTTTTTTGCACTACAATTGCTGAAAAATCGTCTTTTTTATTCTTTTTATAGGGCTTATGATAAAGCTGCCATCAAATGTAATGGCAAGGATGCAGTCACTAACTTCGATCCTTGCATTTATGAAAATGAACTTAATTCATCTGGTACAGTTGTGTATTTGTTCCTTCTTTTTTTTTTAAGAAGAGAGTTTTCTGACAAACATTTTTAATTGTGGTTTCTCAGAATGTAGTAATAAAGCAGCAGATCACAGCCTTGACTTAAGCTTAGGTAGTTCGAGCTCAAAGCAAAACAGCCGTGAAATGGAGGATACTAATAAGAATCAAAATTATCCTTCTATCCAATTTGATGTTGATTGGCGACACCAAGGGTCGAAACCCAAGGTACGTAGAATTTTTCTATACTCAGAATTCAAATGAAATATCTGGTGAAATTAAGGATTTTATCTCTACATTTTCTATGTATACAAGTTAAACTTACCTTTTGTAGCTTAATATCTTCGGAGCGTGATTGTAGTTTCTTACTCCTTACAATATTACATGCATGATGAAATGTTTCGATTATTCGCAGCAACCTAGTCCACTTGATATGGAGTATGGGCGAAGAAGAAATGTGTACAATGAGACGGAAACGTTGCAACTCTTTAGCCAAACGCACCTACATTCTCCGGGATCCTTCAAGACAAATAGCAATGAAATGCAAAGGTTTGGCCAATATATGAGAGCTGGTGACTCCCAAATGATTCCACCACAATTCACCTCCTCAAATTATCAAGTGAGTAACCAATTTTACATGACTTTAACTTGTTAATTTTTTTGTTTACTCAATCAAATCATTTAGTTTGTAGCTATTTCTCCCATGATTTTTTTTAAAAAAAATCCACCACTTATTTTTGCTTTTTTGGTAGTGATACAAGTATATGTCTGTAATACGTGGAACTACTCTGAAAAAATAATACAAGATTACCTCCTTTGAAAGAGTTATATCACGTTGATAATATAATAGTAGTTACGTTGGTGGAGTATTCTAGTAAAAGATCCTGGAGTAAATATGTCCAGTATTTAATTGTTGAGTATTCGCCAAAACCAAAATAATTTTTTAGAAGGTTAATCTAGTTTGGTGGTTATTAATCCTACGATAACCTTATGTAGCTAGAAATATATTTATAATTGTTAAGAATTATGATGATACAGGTTCAGTTTCCAAGCAGCAGCAATAGAAGAGATACTCAACAATGGCAAAGCAATACTGTTCCTCCTCCTCACCTATTTGCAACTGCTGCAGCATCATCAGGATTCCCTCAGCAGATATTAAGACATCAAAACTGGCCTCACAAAAGTGGCTTTAACTACTCTCTCACCAGACCATCCAATTAATTTTCTATCGAGACAGTCGATCGATGCATGGAATATTTTGCGTCTAAGAGAGTTAGCGAACCGCACGCACCTGAAGGAGGGTTGTGATGTAAACTATAATGTAATATAATATTTACAAGGGTTAATCTTGATGGTAAAAAAAAGCTTTTGAGAGATTCCAACTCTATGGATATAGTTGGTACAAAGCTAACTGAAGAAGAGATATTGAACTAGATTTCTTACTCATGTAAGCTGCCAATTTATACCATCCACAAGTACAGCTACTAAATAAATGTTTTTAATTTTTTGGTGGTCT
| Download sequence region |
Get flanking sequences on SL2.50ch02
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mRNA Solyc02g064960.2.1
mRNA Solyc02g064960.2.1
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Ontology terms
Ontology terms
| terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>Solyc02g064960.2.1 AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
AGTGAGAAGTAAAAAGGAATGGAAAACACACACACTCTCTCTCTAACCTTTTCTTGTAACAACTTAATCTCTCTCTGTAAGTCATCTGTTTTCTTGTTCTTATATTTTCTTTCAACACTCACGGAAAATCTCCATTTCATTATTATAGTTCAGATTCAACTCAACATGTGTATTTAGTAGAGAGAAAAAAAGTAGAGAATATTTATAGGTGAGGGTCAAATTTTAGCTGAGATGAAAGAGCTAAGCAAACAAAACTCTTGAAATTGTTTCTCCGATCCTCTTTTGTTTACTATTGTTTGACTTGTAGAGAAAGAAATGTGGAATCTAAACAACTCTCCAGATCATATAAAGGACTATGAATCAGAAGAAGGTAAAGGTGTTGGATCCATTTCAAATTCAAGTTCATCAGCTGTTGAGGAATTATACGGTTCAGAGGAAGAAGATGAATTTCTCGAACAAAATGGACTAAAAGGCAAGAAAAAGAAAAATATTCCTAGTAAAATATTTGGCTTCTCTATGATTGCTCCACCTAATAATAACAATCACAACGACGATAACTTGTCGTCGGAGAGTGAACCGCCGGTTACCCGGCAGTTTTTTCCGGTTGATGAGTCGGAAATCGGAAGTGGCAATTTTAATGATAGATCTTGTAGATTTCCAAGGGCCCATTGGGCTGGAGTGAAATTCTACCAACCGGAGCCATCTGCTAATTCGCCAGCACTATTGGGGAAGGGTAGTGAGTTGTCGCAACAAGTGCAGCCAATGAAAAAAAGCCGGCGTGGTCCAAGGTCTAGAAGCTCACAGTACCGCGGTGTTACTTTTTATCGGAGAACTGGCCGCTGGGAATCACATATATGGGATTGTGGAAAGCAAGTTTATCTAGGTGGATTTGATACTGCACATGCTGCTGCTCGTGCGTACGATCGGGCAGCAATAAAATTTCGTGGAATGGAGGCGGACATAAACTTTAACCTCGAAGATTATGAGGAAGATTTAAAACAGATGAAGAATTTAACGAAGGAAGAATTTGTTCATGTACTGAGGAGGCAAAGTACTGGTTTTCCGAGGGGAAGTTCTAAGTATAGAGGGGTGACATTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGTCAATTGTTGGGCAAAAAGTACGTTTATTTGGGACTCTTTGATACTGAAAATGAAGCTGCCAGGGCTTATGATAAAGCTGCCATCAAATGTAATGGCAAGGATGCAGTCACTAACTTCGATCCTTGCATTTATGAAAATGAACTTAATTCATCTGAATGTAGTAATAAAGCAGCAGATCACAGCCTTGACTTAAGCTTAGGTAGTTCGAGCTCAAAGCAAAACAGCCGTGAAATGGAGGATACTAATAAGAATCAAAATTATCCTTCTATCCAATTTGATGTTGATTGGCGACACCAAGGGTCGAAACCCAAGCAACCTAGTCCACTTGATATGGAGTATGGGCGAAGAAGAAATGTGTACAATGAGACGGAAACGTTGCAACTCTTTAGCCAAACGCACCTACATTCTCCGGGATCCTTCAAGACAAATAGCAATGAAATGCAAAGGTTTGGCCAATATATGAGAGCTGGTGACTCCCAAATGATTCCACCACAATTCACCTCCTCAAATTATCAAGTTCAGTTTCCAAGCAGCAGCAATAGAAGAGATACTCAACAATGGCAAAGCAATACTGTTCCTCCTCCTCACCTATTTGCAACTGCTGCAGCATCATCAGGATTCCCTCAGCAGATATTAAGACATCAAAACTGGCCTCACAAAAGTGGCTTTAACTACTCTCTCACCAGACCATCCAATTAATTTTCTATCGAGACAGTCGATCGATGCATGGAATATTTTGCGTCTAAGAGAGTTAGCGAACCGCACGCACCTGAAGGAGGGTTGTGATGTAAACTATAATGTAATATAATATTTACAAGGGTTAATCTTGATGGTAAAAAAAAGCTTTTGAGAGATTCCAACTCTATGGATATAGTTGGTACAAAGCTAACTGAAGAAGAGATATTGAACTAGATTTCTTACTCATGTAAGCTGCCAATTTATACCATCCACAAGTACAGCTACTAAATAAATGTTTTTAATTTTTTGGTGGTCT
AGTGAGAAGTAAAAAGGAATGGAAAACACACACACTCTCTCTCTAACCTTTTCTTGTAACAACTTAATCTCTCTCTGTAAGTCATCTGTTTTCTTGTTCTTATATTTTCTTTCAACACTCACGGAAAATCTCCATTTCATTATTATAGTTCAGATTCAACTCAACATGTGTATTTAGTAGAGAGAAAAAAAGTAGAGAATATTTATAGGTGAGGGTCAAATTTTAGCTGAGATGAAAGAGCTAAGCAAACAAAACTCTTGAAATTGTTTCTCCGATCCTCTTTTGTTTACTATTGTTTGACTTGTAGAGAAAGAAATGTGGAATCTAAACAACTCTCCAGATCATATAAAGGACTATGAATCAGAAGAAGGTAAAGGTGTTGGATCCATTTCAAATTCAAGTTCATCAGCTGTTGAGGAATTATACGGTTCAGAGGAAGAAGATGAATTTCTCGAACAAAATGGACTAAAAGGCAAGAAAAAGAAAAATATTCCTAGTAAAATATTTGGCTTCTCTATGATTGCTCCACCTAATAATAACAATCACAACGACGATAACTTGTCGTCGGAGAGTGAACCGCCGGTTACCCGGCAGTTTTTTCCGGTTGATGAGTCGGAAATCGGAAGTGGCAATTTTAATGATAGATCTTGTAGATTTCCAAGGGCCCATTGGGCTGGAGTGAAATTCTACCAACCGGAGCCATCTGCTAATTCGCCAGCACTATTGGGGAAGGGTAGTGAGTTGTCGCAACAAGTGCAGCCAATGAAAAAAAGCCGGCGTGGTCCAAGGTCTAGAAGCTCACAGTACCGCGGTGTTACTTTTTATCGGAGAACTGGCCGCTGGGAATCACATATATGGGATTGTGGAAAGCAAGTTTATCTAGGTGGATTTGATACTGCACATGCTGCTGCTCGTGCGTACGATCGGGCAGCAATAAAATTTCGTGGAATGGAGGCGGACATAAACTTTAACCTCGAAGATTATGAGGAAGATTTAAAACAGATGAAGAATTTAACGAAGGAAGAATTTGTTCATGTACTGAGGAGGCAAAGTACTGGTTTTCCGAGGGGAAGTTCTAAGTATAGAGGGGTGACATTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGTCAATTGTTGGGCAAAAAGTACGTTTATTTGGGACTCTTTGATACTGAAAATGAAGCTGCCAGGGCTTATGATAAAGCTGCCATCAAATGTAATGGCAAGGATGCAGTCACTAACTTCGATCCTTGCATTTATGAAAATGAACTTAATTCATCTGAATGTAGTAATAAAGCAGCAGATCACAGCCTTGACTTAAGCTTAGGTAGTTCGAGCTCAAAGCAAAACAGCCGTGAAATGGAGGATACTAATAAGAATCAAAATTATCCTTCTATCCAATTTGATGTTGATTGGCGACACCAAGGGTCGAAACCCAAGCAACCTAGTCCACTTGATATGGAGTATGGGCGAAGAAGAAATGTGTACAATGAGACGGAAACGTTGCAACTCTTTAGCCAAACGCACCTACATTCTCCGGGATCCTTCAAGACAAATAGCAATGAAATGCAAAGGTTTGGCCAATATATGAGAGCTGGTGACTCCCAAATGATTCCACCACAATTCACCTCCTCAAATTATCAAGTTCAGTTTCCAAGCAGCAGCAATAGAAGAGATACTCAACAATGGCAAAGCAATACTGTTCCTCCTCCTCACCTATTTGCAACTGCTGCAGCATCATCAGGATTCCCTCAGCAGATATTAAGACATCAAAACTGGCCTCACAAAAGTGGCTTTAACTACTCTCTCACCAGACCATCCAATTAATTTTCTATCGAGACAGTCGATCGATGCATGGAATATTTTGCGTCTAAGAGAGTTAGCGAACCGCACGCACCTGAAGGAGGGTTGTGATGTAAACTATAATGTAATATAATATTTACAAGGGTTAATCTTGATGGTAAAAAAAAGCTTTTGAGAGATTCCAACTCTATGGATATAGTTGGTACAAAGCTAACTGAAGAAGAGATATTGAACTAGATTTCTTACTCATGTAAGCTGCCAATTTATACCATCCACAAGTACAGCTACTAAATAAATGTTTTTAATTTTTTGGTGGTCT
Protein sequence
Protein sequence
| translated polypeptide sequence |
>Solyc02g064960.2.1 AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
MWNLNNSPDHIKDYESEEGKGVGSISNSSSSAVEELYGSEEEDEFLEQNGLKGKKKKNIPSKIFGFSMIAPPNNNNHNDDNLSSESEPPVTRQFFPVDESEIGSGNFNDRSCRFPRAHWAGVKFYQPEPSANSPALLGKGSELSQQVQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGMEADINFNLEDYEEDLKQMKNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQLLGKKYVYLGLFDTENEAARAYDKAAIKCNGKDAVTNFDPCIYENELNSSECSNKAADHSLDLSLGSSSSKQNSREMEDTNKNQNYPSIQFDVDWRHQGSKPKQPSPLDMEYGRRRNVYNETETLQLFSQTHLHSPGSFKTNSNEMQRFGQYMRAGDSQMIPPQFTSSNYQVQFPSSSNRRDTQQWQSNTVPPPHLFATAAASSGFPQQILRHQNWPHKSGFNYSLTRPSN*
MWNLNNSPDHIKDYESEEGKGVGSISNSSSSAVEELYGSEEEDEFLEQNGLKGKKKKNIPSKIFGFSMIAPPNNNNHNDDNLSSESEPPVTRQFFPVDESEIGSGNFNDRSCRFPRAHWAGVKFYQPEPSANSPALLGKGSELSQQVQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGMEADINFNLEDYEEDLKQMKNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQLLGKKYVYLGLFDTENEAARAYDKAAIKCNGKDAVTNFDPCIYENELNSSECSNKAADHSLDLSLGSSSSKQNSREMEDTNKNQNYPSIQFDVDWRHQGSKPKQPSPLDMEYGRRRNVYNETETLQLFSQTHLHSPGSFKTNSNEMQRFGQYMRAGDSQMIPPQFTSSNYQVQFPSSSNRRDTQQWQSNTVPPPHLFATAAASSGFPQQILRHQNWPHKSGFNYSLTRPSN*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
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GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
HQ586952 Solanum lycopersicum AP2 transcription factor SlAP2b mRNA, complete cds.
| Other genome matches | None |
Literature annotations [1]
Literature annotations [1]
| [Associate publication] [Matching publications] |
Transcriptome and Metabolite Profiling Show That APETALA2a Is a Major Regulator of Tomato Fruit Ripening.
The Plant cell (2011)
Show / hide abstract
Show / hide abstract
Fruit ripening in tomato (Solanum lycopersicum) requires the coordination of both developmental cues as well as the plant hormone ethylene. Although the role of ethylene in mediating climacteric ripening has been established, knowledge regarding the developmental regulators that modulate the involvement of ethylene in tomato fruit ripening is still lacking. Here, we show that the tomato APETALA2a (AP2a) transcription factor regulates fruit ripening via regulation of ethylene biosynthesis and signaling. RNA interference (RNAi)-mediated repression of AP2a resulted in alterations in fruit shape, orange ripe fruits, and altered carotenoid accumulation. Microarray expression analyses of the ripe AP2 RNAi fruits showed altered expression of genes involved in various metabolic pathways, such as the phenylpropanoid and carotenoid pathways, as well as in hormone synthesis and perception. Genes involved in chromoplast differentiation and other ripening-associated processes were also differentially expressed, but softening and ethylene biosynthesis occurred in the transgenic plants. Ripening regulators RIPENING-INHIBITOR, NON-RIPENING, and COLORLESS NON-RIPENING (CNR) function upstream of AP2a and positively regulate its expression. In the pericarp of AP2 RNAi fruits, mRNA levels of CNR were elevated, indicating that AP2a and CNR are part of a negative feedback loop in the regulation of ripening. Moreover, we demonstrated that CNR binds to the promoter of AP2a in vitro.
Karlova, R. Rosin, FM. Busscher-Lange, J. Parapunova, V. Do, PT. Fernie, AR. Fraser, PD. Baxter, C. Angenent, GC. de Maagd, RA.
The Plant cell.
2011.
().
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Ontology annotations (2)
Ontology annotations (2)
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